RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LOC285095A0A1B0GVY8 99 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 NDUFC2-KCTD14E9PQ53 114 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 M0R1X1 148 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 PHOX2AO14813 284 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 CYB5BO43169 146 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 ENTPD6O75354 484 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 CA11O75493 328 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 DHRS3O75911 302 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 OR2A4O95047 310 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 APODP05090 189 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 HLA-DQB2P05538 268 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 UBBP0CG47 229 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 PIPP12273 146 aaPredicted RBP2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 GTF2F2P13984 249 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 ADCYAP1P18509 176 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 ELK1P19419 428 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 SDC2P34741 201 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 IDH2P48735 452 aaKnown RBP2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 CLDN12P56749 244 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 UBA52P62987 128 aaKnown RBP2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 CDK5Q00535 292 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 FABP5Q01469 135 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 MLLT11Q13015 90 aaPredicted RBP2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 TSNQ15631 228 aaKnown RBP2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM241Q24JQ0 296 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 TBC1D28Q2M2D7 210 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC25A35Q3KQZ1 300 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 PDZD11Q5EBL8 140 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 AKR1C8PQ5T2L2 129 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF660Q6AZW8 331 aaPredicted RBP2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF774Q6NX45 483 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 ALKAL2Q6UX46 152 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 Q6ZSR6 202 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 LINC01551Q86U37 167 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 MDP1Q86V88 176 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 C11orf53Q8IXP5 236 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 Q8N402 240 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 DRAM1Q8N682 238 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 OR10G2Q8NGC3 310 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 OR10D4PQ8NGN7 298 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 OR1J4Q8NGS1 313 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 OR2T35Q8NGX2 323 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 OR10K1Q8NGX5 313 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 PIGXQ8TBF5 258 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 C11orf40Q8WZ69 217 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 GHSRQ92847 366 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 OR10C1Q96KK4 312 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 IMMP1LQ96LU5 166 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 OR2A7Q96R45 310 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 OR4K3Q96R72 315 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 NRTNQ99748 197 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 ADAT1Q9BUB4 502 aaKnown RBP2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 PRO1933Q9H354 126 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 METTL17Q9H7H0 456 aaPredicted RBP2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 TNFRSF19Q9NS68 423 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 CA10Q9NS85 328 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 COMMD3Q9UBI1 195 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC22A13Q9Y226 551 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 ENPP4Q9Y6X5 453 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 PTPRSQ13332 1948 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 PLXNA4Q9HCM2 1894 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 RALGAPA1Q6GYQ0 2036 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 MICAL3Q7RTP6 2002 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 FBN3Q75N90 2809 aa2.73□□□□□ -1.97
SFSWAP-211ENST00000542813 SCN10AQ9Y5Y9 1956 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 WDFY3Q8IZQ1 3526 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 DSPPQ9NZW4 1301 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 C2CD3Q4AC94 2353 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 IGLV11-55A0A075B6I3 123 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 IGHV6-1A0A0B4J1U7 121 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 A6NIN4 97 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 OR5H1A6NKK0 313 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 F5H5K5 113 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 F5H768 121 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 H0Y980 276 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 REM1O75628 298 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 APC2O95996 2303 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 TCRBP04435 133 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 OR5AC1P0C628 307 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF286BP0CG31 522 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 KCNE1P15382 129 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 GRPRP30550 384 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 BRS3P32247 399 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 SCN1AP35498 2009 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 INPP1P49441 399 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 TAF6P49848 677 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 TPI1P60174 286 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 SNRPGP62308 76 aaKnown RBP2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 RPL38P63173 70 aaKnown RBP2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 HBG1P69891 147 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 HBG2P69892 147 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 PRDX1Q06830 199 aaKnown RBP2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF616Q08AN1 781 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 ADIGQ0VDE8 80 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 INSL4Q14641 139 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 TAF9Q16594 264 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 SMIM21Q3B7S5 101 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC25A30Q5SVS4 291 aa2.72□□□□□ -1.97
SFSWAP-211ENST00000542813 COL5A1-AS1Q5SY13 56 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms