RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 DEFB107AQ8IZN7 70 aa6.64□□□□□ -1.35
YBX3-211ENST00000541351 PACRGLQ8N7B6 248 aa6.64□□□□□ -1.35
YBX3-211ENST00000541351 GGHQ92820 318 aa6.64□□□□□ -1.35
YBX3-211ENST00000541351 NRBF2Q96F24 287 aa6.64□□□□□ -1.35
YBX3-211ENST00000541351 SRSF8Q9BRL6 282 aaKnown RBP6.64□□□□□ -1.35
YBX3-211ENST00000541351 AIFM2Q9BRQ8 373 aa6.64□□□□□ -1.35
YBX3-211ENST00000541351 CENPOQ9BU64 300 aa6.64□□□□□ -1.35
YBX3-211ENST00000541351 SDHAF2Q9NX18 166 aa6.64□□□□□ -1.35
YBX3-211ENST00000541351 RABAC1Q9UI14 185 aa6.64□□□□□ -1.35
YBX3-211ENST00000541351 TRBV6-6A0A0A6YYG2 114 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 ZAR1LA6NP61 321 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 M0R129 80 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 KBTBD11O94819 623 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 IL6RP08887 468 aaPredicted RBP6.63□□□□□ -1.35
YBX3-211ENST00000541351 AREGP15514 252 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 PRKACGP22612 351 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 KRTAP10-1P60331 282 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 FLOT2Q14254 428 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 ACTL10Q5JWF8 245 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 SIGIRRQ6IA17 410 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 SSX7Q7RTT5 188 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 MFSD4AQ8N468 514 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 MUL1Q969V5 352 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 ARPC5LQ9BPX5 153 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 PLEKHJ1Q9NW61 149 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 LINC00588Q9Y4M8 146 aa6.63□□□□□ -1.35
YBX3-211ENST00000541351 IGHV3OR16-8A0A075B7F1 116 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 RPL8P62917 257 aaKnown RBP6.62□□□□□ -1.35
YBX3-211ENST00000541351 TRIM16LQ309B1 348 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 Q56UQ5 140 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 C19orf35Q6ZS72 473 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 HSD17B13Q7Z5P4 300 aaPredicted RBP6.62□□□□□ -1.35
YBX3-211ENST00000541351 NFE4Q86UQ8 179 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 CLVS1Q8IUQ0 354 aaPredicted RBP6.62□□□□□ -1.35
YBX3-211ENST00000541351 IQCF2Q8IXL9 164 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 TMEM167AQ8TBQ9 72 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 OR10C1Q96KK4 312 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 FAAP24Q9BTP7 215 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 C21orf62Q9NYP8 219 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 HSF4Q9ULV5 492 aa6.62□□□□□ -1.35
YBX3-211ENST00000541351 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 A0A1W2PS18 150 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 HBE1P02100 147 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 UBBP0CG47 229 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 PRB4P10163 310 aaPredicted RBP6.61□□□□□ -1.35
YBX3-211ENST00000541351 SRMP19623 302 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 CRHBPP24387 322 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 DUTP33316 252 aaKnown RBP6.61□□□□□ -1.35
YBX3-211ENST00000541351 TMBIM6P55061 237 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 ZNF846Q147U1 533 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 ZNF705AQ6ZN79 300 aaPredicted RBP6.61□□□□□ -1.35
YBX3-211ENST00000541351 C6orf201Q7Z4U5 140 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 LRRTM1Q86UE6 522 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 HS3ST5Q8IZT8 346 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 UBAC2Q8NBM4 344 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 OR6M1Q8NGM8 313 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 OR10J5Q8NHC4 309 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 S100ZQ8WXG8 99 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 CCDC124Q96CT7 223 aaKnown RBP6.61□□□□□ -1.35
YBX3-211ENST00000541351 ZNF414Q96IQ9 312 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 KRTAP9-2Q9BYQ4 174 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 WDR12Q9GZL7 423 aaKnown RBP6.61□□□□□ -1.35
YBX3-211ENST00000541351 C12orf4Q9NQ89 552 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 XCL2Q9UBD3 114 aa6.61□□□□□ -1.35
YBX3-211ENST00000541351 ZNF705FA8MVS1 300 aaPredicted RBP6.6□□□□□ -1.35
YBX3-211ENST00000541351 RGS13O14921 159 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 FCGR3BO75015 233 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 DIRAS3O95661 229 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 HRASP01112 189 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 ZNF705DP0CH99 300 aaPredicted RBP6.6□□□□□ -1.35
YBX3-211ENST00000541351 ZNF705BP0CI00 300 aaPredicted RBP6.6□□□□□ -1.35
YBX3-211ENST00000541351 OR2B8PP59922 312 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 MRPS15P82914 257 aaKnown RBP6.6□□□□□ -1.35
YBX3-211ENST00000541351 KIR3DS1Q14943 382 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 CCDC58Q4VC31 144 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 OR2G6Q5TZ20 316 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 NKAIN3Q8N8D7 197 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 OR4A4PQ8NGN8 299 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 OR4S2Q8NH73 311 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 NARS2Q96I59 477 aaKnown RBP6.6□□□□□ -1.35
YBX3-211ENST00000541351 BCL7BQ9BQE9 202 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 UPK3BQ9BT76 320 aa6.6□□□□□ -1.35
YBX3-211ENST00000541351 IGHV3OR16-12A0A075B7B8 117 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 IGHV3-49A0A0A0MS15 119 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 KNCNA6PVL3 124 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 TRDCB7Z8K6 153 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 H3BMQ9 156 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 SLC22A5O76082 557 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 CD36P16671 472 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 HLA-GP17693 338 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 NAT1P18440 290 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 CELP19835 753 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 LINC00315P59091 139 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 MEDAGQ5VYS4 303 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 SLC25A24Q6NUK1 477 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 KCTD9Q7L273 389 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 GDPD1Q8N9F7 314 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 STXBP6Q8NFX7 210 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 RAB2BQ8WUD1 216 aa6.59□□□□□ -1.35
YBX3-211ENST00000541351 TMEM59Q9BXS4 323 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms