RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 ZNF343Q6P1L6 599 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 Q6ZN92 141 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 UPK2O00526 184 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 NABP2Q9BQ15 211 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 BEX4Q9NWD9 120 aaPredicted RBP11.85□□□□□ -0.51
COLCA1-204ENST00000540738 ELF5Q9UKW6 265 aaPredicted RBP11.85□□□□□ -0.51
COLCA1-204ENST00000540738 NLRC5Q86WI3 1866 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 HEATR5BQ9P2D3 2071 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 AGAP20933 346 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 CX3CL1P78423 397 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 TUSC1Q2TAM9 212 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 GPR82Q96P67 336 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 TRAV41A0A0B4J266 112 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 IGKV1-9A0A0C4DH69 117 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 H3BUX3 64 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 ZP1P60852 638 aa11.85□□□□□ -0.51
COLCA1-204ENST00000540738 OR4C46A6NHA9 309 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 RRHO14718 337 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 SRD5A3Q9H8P0 318 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 IGHV3-23P01764 117 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 SAPCD1Q5SSQ6 148 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 TP53RKQ96S44 253 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 SLX1AQ9BQ83 275 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 RSG1Q9BU20 258 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 SMDT1Q9H4I9 107 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 TCL1AP56279 114 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 HERVK_113P61574 105 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 RUNX1Q01196 453 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 NHLRC3Q5JS37 347 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 TPTE2P1Q5T6R2 138 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 NUP210Q8TEM1 1887 aaPredicted RBP11.84□□□□□ -0.51
COLCA1-204ENST00000540738 ARTNQ5T4W7 220 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 TMEM200BQ69YZ2 307 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 OR11H7Q8NGC8 314 aa11.84□□□□□ -0.51
COLCA1-204ENST00000540738 ETV2O00321 342 aaPredicted RBP11.83□□□□□ -0.52
COLCA1-204ENST00000540738 RHOGP84095 191 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 DHRS11Q6UWP2 260 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 IGHV3OR16-13A0A075B7E8 117 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 IGHV3-74A0A0B4J1X5 117 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 RELBQ01201 579 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 AANATQ16613 207 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 ZNF319Q9P2F9 582 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 J3QLI3 93 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 COL8A2P25067 703 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 HIST3H3Q16695 136 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 FOXL2NBQ6ZUU3 175 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 BCL2P10415 239 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 NEUROG1Q92886 237 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 OR5AC2Q9NZP5 309 aa11.83□□□□□ -0.52
COLCA1-204ENST00000540738 KLF2Q9Y5W3 355 aaPredicted RBP11.83□□□□□ -0.52
COLCA1-204ENST00000540738 SNURFLB1AK76 121 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 PMCHP20382 165 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 CEACAM4O75871 244 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 GPX4P36969 197 aaPredicted RBP11.82□□□□□ -0.52
COLCA1-204ENST00000540738 ZNF600Q6ZNG1 722 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 TECTAO75443 2155 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 TCAPO15273 167 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 HIST1H3AP68431 136 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 RPRMQ9NS64 109 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 ROS1P08922 2347 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 ZNF207O43670 478 aaKnown RBP11.82□□□□□ -0.52
COLCA1-204ENST00000540738 IGHV3-48P01763 117 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 PRSS1P07477 247 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
COLCA1-204ENST00000540738 GCSHP23434 173 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 TEX50A0A1B0GTY4 177 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 TNFSF13O75888 250 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 C1QL1O75973 258 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 CRISP2P16562 243 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 STHQ8IWL8 128 aa11.82□□□□□ -0.52
COLCA1-204ENST00000540738 A0A0B4J293 547 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 IGKV3-20P01619 116 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 CD5P06127 495 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 ANOS1P23352 680 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 CD24P25063 80 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 TWIST1Q15672 202 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 LDLRAD2Q5SZI1 272 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 PVRIGQ6DKI7 326 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
COLCA1-204ENST00000540738 BRD3OSQ6XYD6 125 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 LINC00305Q7Z4B0 112 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 RPRMLQ8N4K4 120 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 C11orf44Q8N8P7 122 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 ZNF257Q9Y2Q1 563 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 TRGC1P0CF51 173 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 HGFACQ04756 655 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 KLHDC1Q8N7A1 406 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 LHFPL5Q8TAF8 219 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 TMEM37Q8WXS4 190 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 CLDN16Q9Y5I7 305 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 KRTDAPP60985 99 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 PRB3Q04118 309 aaPredicted RBP11.81□□□□□ -0.52
COLCA1-204ENST00000540738 FAM89BQ8N5H3 189 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 ST6GAL2Q96JF0 529 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 IGHV3-49A0A0A0MS15 119 aa11.81□□□□□ -0.52
COLCA1-204ENST00000540738 DUSP14O95147 198 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms