RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 IFNA4P05014 189 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 FGF7P21781 194 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 USF1P22415 310 aaPredicted RBP7.68□□□□□ -1.18
PAAF1-209ENST00000540659 CD24P25063 80 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 NPY1RP25929 384 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 FHITP49789 147 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 BPIFB3P59826 476 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 GNB1P62873 340 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 RPL8P62917 257 aaKnown RBP7.68□□□□□ -1.18
PAAF1-209ENST00000540659 BLOC1S1P78537 153 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 HES1Q14469 280 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 PLGLAQ15195 96 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 PSG5Q15238 335 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 SSX2Q16385 188 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 TNXAQ16473 311 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 ATP6V1FQ16864 119 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 LRRC75BQ2VPJ9 315 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 C10orf55Q5SWW7 151 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 AKR1C8PQ5T2L2 129 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 SLC24A4Q8NFF2 622 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 OR10W1Q8NGF6 305 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 PINX1Q96BK5 328 aaKnown RBP7.68□□□□□ -1.18
PAAF1-209ENST00000540659 SAT2Q96F10 170 aaPredicted RBP7.68□□□□□ -1.18
PAAF1-209ENST00000540659 TBX15Q96SF7 602 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 TMEM147Q9BVK8 224 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 WDR61Q9GZS3 305 aaKnown RBP7.68□□□□□ -1.18
PAAF1-209ENST00000540659 ZNF430Q9H8G1 570 aaPredicted RBP7.68□□□□□ -1.18
PAAF1-209ENST00000540659 UNKLQ9H9P5 680 aaKnown RBP7.68□□□□□ -1.18
PAAF1-209ENST00000540659 UQCC1Q9NVA1 299 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 METTL1Q9UBP6 276 aaKnown RBP7.68□□□□□ -1.18
PAAF1-209ENST00000540659 ZNF257Q9Y2Q1 563 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 F8P00451 2351 aa7.68□□□□□ -1.18
PAAF1-209ENST00000540659 USF3Q68DE3 2245 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 IGHV3OR16-10A0A075B7F0 116 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 B4DSR2 109 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 E7EUB6 86 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 AGPAT2O15120 278 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 TSPAN9O75954 239 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 IGKV1D-33P01593 117 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 IGKV1-33P01594 117 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 LGALS7P47929 136 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 F2RL1P55085 397 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 ELLP55199 621 aaPredicted RBP7.67□□□□□ -1.18
PAAF1-209ENST00000540659 AKR1C1Q04828 323 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 PJVKQ0ZLH3 352 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 CLEC12BQ2HXU8 276 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 DEFB113Q30KQ7 82 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 HSD17B13Q7Z5P4 300 aaPredicted RBP7.67□□□□□ -1.18
PAAF1-209ENST00000540659 MRPL41Q8IXM3 137 aaKnown RBP7.67□□□□□ -1.18
PAAF1-209ENST00000540659 DYNAPQ8N1N2 210 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 OR1L8Q8NGR8 309 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 TMEM170AQ8WVE7 144 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 C17orf50Q8WW18 174 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 TAF15Q92804 592 aaKnown RBP eCLIP7.67□□□□□ -1.18
PAAF1-209ENST00000540659 MARC2Q969Z3 335 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 RNF5Q99942 180 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 FBXL15Q9H469 300 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 TMEM231Q9H6L2 316 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 VSIRQ9H7M9 311 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 PARP11Q9NR21 331 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 ITPR3Q14573 2671 aa7.67□□□□□ -1.18
PAAF1-209ENST00000540659 HIVEP1P15822 2718 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 TRAV20A0A0B4J274 112 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 A0A1W2PN81 502 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 CGB1A6NKQ9 187 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 VENTXO95231 258 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 TSPAN15O95858 294 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 REG1AP05451 166 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 SNRNP70P08621 437 aaKnown RBP7.66□□□□□ -1.18
PAAF1-209ENST00000540659 APELAP0DMC3 54 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 CD1BP29016 333 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 CHRNA7P36544 502 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 ERHP84090 104 aaKnown RBP7.66□□□□□ -1.18
PAAF1-209ENST00000540659 TUSC1Q2TAM9 212 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 MINOS1Q5TGZ0 78 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 BTNL8Q6UX41 500 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 TEX45Q8NA69 505 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 OR5B3Q8NH48 314 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 CFHR4Q92496 578 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 LINC00052Q96N35 136 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 PARD6GQ9BYG4 376 aaPredicted RBP7.66□□□□□ -1.18
PAAF1-209ENST00000540659 NDUFA4L2Q9NRX3 87 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 MINOS1-NBL1R4GNA1 71 aa7.66□□□□□ -1.18
PAAF1-209ENST00000540659 ZNF469Q96JG9 3925 aaPredicted RBP7.66□□□□□ -1.18
PAAF1-209ENST00000540659 C17orf112F2Z3M2 114 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 J3QLI3 93 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 ACTL6BO94805 426 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 CRYGBP07316 175 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 FLNAP21333 2647 aaKnown RBP7.65□□□□□ -1.18
PAAF1-209ENST00000540659 SNCAP37840 140 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 RPL27AP46776 148 aaKnown RBP7.65□□□□□ -1.18
PAAF1-209ENST00000540659 RAB5CP51148 216 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 UBE2E1P51965 193 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 SRSF3P84103 164 aaKnown RBP7.65□□□□□ -1.18
PAAF1-209ENST00000540659 MMDQ15546 238 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 MRGPRG-AS1Q2M3A8 158 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 FBLN7Q53RD9 439 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 RUSC1-AS1Q66K80 236 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 IL34Q6ZMJ4 242 aa7.65□□□□□ -1.18
PAAF1-209ENST00000540659 MMD2Q8IY49 270 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms