RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 BEST4Q8NFU0 473 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 OR13F1Q8NGS4 319 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 BORCS5Q969J3 196 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 ATP6V0BQ99437 205 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 RARRES2Q99969 163 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 SLC5A7Q9GZV3 580 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 CSTL1Q9H114 145 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 NDUFB11Q9NX14 153 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 BLOC1S6Q9UL45 172 aa9.23□□□□□ -0.93
COPS7A-211ENST00000540408 MPTX1A8MV57 137 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 OR13C7P0DN81 318 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 AQP4P55087 323 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 TCTAP57738 103 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 ERVK-16P61578 105 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 RBMS2Q15434 407 aaKnown RBP9.22□□□□□ -0.93
COPS7A-211ENST00000540408 POU2AF1Q16633 256 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 UBAC2Q8NBM4 344 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 OR10W1Q8NGF6 305 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 CMTM3Q96MX0 182 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 PLEKHA2Q9HB19 425 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 TMEM140Q9NV12 185 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 C21orf62Q9NYP8 219 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 DAPK2Q9UIK4 370 aa9.22□□□□□ -0.93
COPS7A-211ENST00000540408 TRAV3A0A0B4J244 114 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 SMIM30A4D0T7 59 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 C15orf62A8K5M9 175 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 SSX5O60225 188 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 PPYP01298 95 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 CTSDP07339 412 aaPredicted RBP9.21□□□□□ -0.94
COPS7A-211ENST00000540408 FCGR2BP31994 310 aaPredicted RBP9.21□□□□□ -0.94
COPS7A-211ENST00000540408 FXYD4P59646 89 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 Q56UQ5 140 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 AADACL3Q5VUY0 350 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 TPRA1Q86W33 373 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 APRG1Q8IVJ8 170 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 OR1L8Q8NGR8 309 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 HINT2Q9BX68 163 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 COMMD9Q9P000 198 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 FBXL17Q9UF56 701 aa9.21□□□□□ -0.94
COPS7A-211ENST00000540408 TEX50A0A1B0GTY4 177 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 ZNF207O43670 478 aaKnown RBP9.2□□□□□ -0.94
COPS7A-211ENST00000540408 MRPS14O60783 128 aaKnown RBP9.2□□□□□ -0.94
COPS7A-211ENST00000540408 SNAPC5O75971 98 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 ADMP35318 185 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 PAFAH1B2P68402 229 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 RELQ04864 619 aaPredicted RBP9.2□□□□□ -0.94
COPS7A-211ENST00000540408 NR2C2APQ86WQ0 139 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 TSPAN14Q8NG11 270 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 OR11H2Q8NH07 326 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 OR51H1Q8NH63 302 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 C2CD4CQ8TF44 421 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 SCARB1Q8WTV0 552 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 LSM10Q969L4 123 aaKnown RBP9.2□□□□□ -0.94
COPS7A-211ENST00000540408 SMPXQ9UHP9 88 aa9.2□□□□□ -0.94
COPS7A-211ENST00000540408 RRP15Q9Y3B9 282 aaKnown RBP9.2□□□□□ -0.94
COPS7A-211ENST00000540408 F11RQ9Y624 299 aaKnown RBP9.2□□□□□ -0.94
COPS7A-211ENST00000540408 TRAV18A0A075B6X5 111 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 IGHV3OR16-8A0A075B7F1 116 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 IGHV3-21A0A0B4J1V1 117 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 NUPL2O15504 423 aaKnown RBP9.19□□□□□ -0.94
COPS7A-211ENST00000540408 YIF1AO95070 293 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 S1PR2O95136 353 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 TFPI2P48307 235 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 NANOS2P60321 138 aaKnown RBP9.19□□□□□ -0.94
COPS7A-211ENST00000540408 WT1-ASQ06250 92 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 TMEM17Q86X19 198 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 HOGA1Q86XE5 327 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 GVQW1Q8N7I0 195 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 TMEM116Q8NCL8 245 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 GIMAP1Q8WWP7 306 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 TMEM56Q96MV1 263 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 CHRDL1Q9BU40 450 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 RHPN1-AS1Q9BWJ2 59 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 VCX3BQ9H321 246 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 C11orf68Q9H3H3 251 aaKnown RBP9.19□□□□□ -0.94
COPS7A-211ENST00000540408 TXNL4BQ9NX01 149 aaKnown RBP9.19□□□□□ -0.94
COPS7A-211ENST00000540408 RHBDL2Q9NX52 303 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 FKBP11Q9NYL4 201 aa9.19□□□□□ -0.94
COPS7A-211ENST00000540408 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 TRAV14DV4A0A0A6YYC5 116 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 IGHV7-4-1A0A0J9YVY3 117 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 MARCH11A6NNE9 402 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 CD5P06127 495 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 EIF4EP06730 217 aaKnown RBP9.18□□□□□ -0.94
COPS7A-211ENST00000540408 PTHLHP12272 177 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 FGF9P31371 208 aaPredicted RBP9.18□□□□□ -0.94
COPS7A-211ENST00000540408 CBX5P45973 191 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 HERV-K104P61576 105 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 SFXN4Q6P4A7 337 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 ZNF818PQ6ZRF7 136 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 CENPSQ8N2Z9 138 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 LGALS14Q8TCE9 139 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 CNBD2Q96M20 576 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 RNF2Q99496 336 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 DIABLOQ9NR28 239 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 NDUFA4L2Q9NRX3 87 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 SSR3Q9UNL2 185 aa9.18□□□□□ -0.94
COPS7A-211ENST00000540408 OR51B2Q9Y5P1 312 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms