RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 LCN12Q6JVE5 192 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 NABP2Q9BQ15 211 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 GNB4Q9HAV0 340 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 WASHC3Q9Y3C0 194 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 OR51B2Q9Y5P1 312 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 TNCP24821 2201 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 PRB4P10163 310 aaPredicted RBP10.81□□□□□ -0.68
MSH6-210ENST00000540021 PLGLAQ15195 96 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 ARFGEF3Q5TH69 2177 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 CYC1P08574 325 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 NPPCP23582 126 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 FOXF2Q12947 444 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 COLCA1Q6ZS62 124 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 Q6ZWC4 215 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 PILRBQ9UKJ0 227 aa10.81□□□□□ -0.68
MSH6-210ENST00000540021 YTHDF2Q9Y5A9 579 aaKnown RBP10.81□□□□□ -0.68
MSH6-210ENST00000540021 GFRA1P56159 465 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 SRSF7Q16629 238 aaKnown RBP eCLIP10.8□□□□□ -0.68
MSH6-210ENST00000540021 DNLZQ5SXM8 178 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 RNF2Q99496 336 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 RAB9BQ9NP90 201 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 PLCE1Q9P212 2302 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 C15orf62A8K5M9 175 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 TNFSF13O75888 250 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 ZNF295-AS1Q8N0V1 137 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 SSBP4Q9BWG4 385 aaPredicted RBP10.8□□□□□ -0.68
MSH6-210ENST00000540021 GGTLC1Q9BX51 225 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 YLPM1P49750 1951 aaKnown RBP10.8□□□□□ -0.68
MSH6-210ENST00000540021 EFNB3Q15768 340 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 EAF1Q96JC9 268 aaPredicted RBP10.8□□□□□ -0.68
MSH6-210ENST00000540021 LPAR2Q9HBW0 351 aa10.8□□□□□ -0.68
MSH6-210ENST00000540021 FOXL1Q12952 345 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 TMEM105Q8N8V8 129 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 RNF138Q8WVD3 245 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 SELENOKQ9Y6D0 94 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 MED13Q9UHV7 2174 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 SLC35E4Q6ICL7 350 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 ACP7Q6ZNF0 438 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 OR10X1Q8NGY0 326 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 OR2T6Q8NHC8 308 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 MGST2Q99735 147 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 TMEM210A6NLX4 147 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 CD99P14209 185 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 BCL2L2Q92843 193 aaPredicted RBP10.79□□□□□ -0.68
MSH6-210ENST00000540021 CELSR3Q9NYQ7 3312 aa10.79□□□□□ -0.68
MSH6-210ENST00000540021 DKK1O94907 266 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 IL18BPO95998 194 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 LHFPL4Q7Z7J7 247 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 WDR86Q86TI4 376 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 TXNDC17Q9BRA2 123 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 LAMTOR2Q9Y2Q5 125 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 OR1B1Q8NGR6 318 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 GMPPAQ96IJ6 420 aaPredicted RBP10.78□□□□□ -0.68
MSH6-210ENST00000540021 HES4Q9HCC6 221 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 CACNA1BQ00975 2339 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 MT-ND6P03923 174 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 LINC00869P0C866 280 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 STAG3L2P0CL84 134 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 STAG3L3P0CL85 134 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 TNFSF4P23510 183 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 HSPE1P61604 102 aaKnown RBP10.78□□□□□ -0.68
MSH6-210ENST00000540021 GABRA6Q16445 453 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 NRN1LQ496H8 165 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 UNQ5815/PRO19632Q6UWF5 114 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 ZNF738Q8NE65 137 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 K7ESF4 209 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 HLA-DQA1P01909 254 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 SSX8Q7RTT4 187 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 MOB3BQ86TA1 216 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 OR8B2Q96RD0 313 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 PROCRQ9UNN8 238 aa10.78□□□□□ -0.68
MSH6-210ENST00000540021 SERTM2A0A1B0GWG4 89 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 TMPRSS2O15393 492 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 Q6ZVH6 145 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 COQ2Q96H96 371 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 OR2V2Q96R30 315 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 LY6G6EA0A0G2JKS1 128 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 AMY1AP04745 511 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 FRMD6-AS1P0C7T7 363 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 BPIFB3P59826 476 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 RELBQ01201 579 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 HARBI1Q96MB7 349 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 PYGO2Q9BRQ0 406 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 CALYQ9NYX4 217 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 FBXL7Q9UJT9 491 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 U3KQA8 63 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 VPS13AQ96RL7 3174 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 DUTP33316 252 aaKnown RBP10.77□□□□□ -0.69
MSH6-210ENST00000540021 Q6ZSR3 168 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 CCL13Q99616 98 aa10.77□□□□□ -0.69
MSH6-210ENST00000540021 ACACAQ13085 2346 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 TRBV6-6A0A0A6YYG2 114 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 ACSF3Q4G176 576 aaPredicted RBP10.76□□□□□ -0.69
MSH6-210ENST00000540021 OR4A47Q6IF82 309 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 FLYWCH2Q96CP2 140 aaKnown RBP10.76□□□□□ -0.69
MSH6-210ENST00000540021 NEU1Q99519 415 aa10.76□□□□□ -0.69
MSH6-210ENST00000540021 AMMECR1Q9Y4X0 333 aaPredicted RBP10.76□□□□□ -0.69
MSH6-210ENST00000540021 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.76□□□□□ -0.69
MSH6-210ENST00000540021 MGST3O14880 152 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms