RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 MFAP2P55001 183 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 ARFRP1Q13795 201 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 IDNKQ5T6J7 187 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 MZT2AQ6P582 158 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 PLET1Q6UQ28 207 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 H1FOOQ8IZA3 346 aaPredicted RBP8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 VKORC1L1Q8N0U8 176 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 OR11H2Q8NH07 326 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 GFI1Q99684 422 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 PLGRKTQ9HBL7 147 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 DAPK2Q9UIK4 370 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 KCNK7Q9Y2U2 307 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 PRELID3BQ9Y3B1 194 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 C11orf94C9JXX5 98 aa8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 SLC17A2O00624 439 aa8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 GPR183P32249 361 aa8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 ADMP35318 185 aa8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 CMC4P56277 68 aaPredicted RBP8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 APRG1Q8IVJ8 170 aa8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 PUSL1Q8N0Z8 303 aaKnown RBP8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 ZNF502Q8TBZ5 544 aa8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 CD300LFQ8TDQ1 290 aa8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 MRPS7Q9Y2R9 242 aaKnown RBP8.52□□□□□ -1.05
CLSTN3-209ENST00000539982 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 CTDSP2O14595 271 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 RGS5O15539 181 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 REG1AP05451 166 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 PTBP1P26599 531 aaKnown RBP eCLIP8.51□□□□□ -1.054e-6■■□□□ 11.8
CLSTN3-209ENST00000539982 RPL30P62888 115 aaKnown RBP8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 RAB11BQ15907 218 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 C2orf76Q3KRA6 126 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 HES5Q5TA89 166 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 KCTD9Q7L273 389 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 ZNF645Q8N7E2 425 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 OR4A5Q8NH83 315 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 S100ZQ8WXG8 99 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 MAFIPQ8WZ33 124 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 TMEM190Q8WZ59 177 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 RAB3CQ96E17 227 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 KRTAP4-5Q9BYR2 181 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 DAZ1Q9NQZ3 744 aaKnown RBP8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 COMMD3Q9UBI1 195 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 FAT2Q9NYQ8 4349 aa8.51□□□□□ -1.05
CLSTN3-209ENST00000539982 J3QRK9 145 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 DEFB4AO15263 64 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 TGOLN2O43493 480 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 CTSDP07339 412 aaPredicted RBP8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 RPA2P15927 270 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 RANBP1P43487 201 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 SCAND1P57086 179 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 RPL8P62917 257 aaKnown RBP8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 OR2B11Q5JQS5 317 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 Q6ZS49 121 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 SSX9Q7RTT3 188 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 OR4S2Q8NH73 311 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 FAM3DQ96BQ1 224 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 THYN1Q9P016 225 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 RBMX2Q9Y388 322 aaKnown RBP8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 DNAH2Q9P225 4427 aa8.5□□□□□ -1.05
CLSTN3-209ENST00000539982 DNAH17Q9UFH2 4485 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 CGB1A6NKQ9 187 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 K7EMT4 169 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 HPGDSO60760 199 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 SLC22A5O76082 557 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 HLA-GP17693 338 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 TNFSF8P32971 234 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 CLDN12P56749 244 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 ZNF846Q147U1 533 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 ZNF124Q15973 351 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 VN1R17PQ8TDU5 208 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 WDR12Q9GZL7 423 aaKnown RBP8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 MIXL1Q9H2W2 232 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 HRH4Q9H3N8 390 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 RAB22AQ9UL26 194 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 SPATA2Q9UM82 520 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 OR2W1Q9Y3N9 320 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 ETV7Q9Y603 341 aa8.49□□□□□ -1.05
CLSTN3-209ENST00000539982 IGKV1D-8A0A087WSZ0 117 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 RAB27BO00194 218 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 NDUFA4O00483 81 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 RTL8CO15255 209 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 HRASP01112 189 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 IGLV2-14P01704 120 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 HLA-DQB1P01920 261 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 GNB3P16520 340 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 ETV6P41212 452 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 BRWD1-AS2P59051 145 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 PLA2G7Q13093 441 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 TMEM187Q14656 261 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 SPANXN2Q5MJ10 180 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 CCDC190Q86UF4 302 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 MFSD4AQ8N468 514 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 SAMD12Q8N8I0 201 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 OR5H6Q8NGV6 325 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 OR10R2Q8NGX6 335 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 LGALS14Q8TCE9 139 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 CMTM3Q96MX0 182 aa8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 HSD17B10Q99714 261 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-209ENST00000539982 C20orf24Q9BUV8 137 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms