RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 A0A0G2JLM5 398 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 C13orf42A0A1B0GVH6 325 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 H0Y980 276 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 B3GALNT1O75752 331 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 TRGV3P03979 118 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 SERPINE2P07093 398 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 HLA-GP17693 338 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 LPAR6P43657 344 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 KLF9Q13886 244 aaPredicted RBP11.44□□□□□ -0.58
USB1-203ENST00000539737 CADM3Q8N126 398 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 GDPD1Q8N9F7 314 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 OR51S1Q8NGJ8 323 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 MARCH1Q8TCQ1 289 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 SCGB3A2Q96PL1 93 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 OR4C12Q96R67 309 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 FAM110AQ9BQ89 295 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 ELOVL1Q9BW60 279 aa11.44□□□□□ -0.58
USB1-203ENST00000539737 A6NHS1 94 aa11.43□□□□□ -0.58
USB1-203ENST00000539737 MSGN1A6NI15 193 aa11.43□□□□□ -0.58
USB1-203ENST00000539737 HSPB1P04792 205 aaKnown RBP11.43□□□□□ -0.58
USB1-203ENST00000539737 RPA2P15927 270 aa11.43□□□□□ -0.58
USB1-203ENST00000539737 PI3P19957 117 aa11.43□□□□□ -0.58
USB1-203ENST00000539737 RPL27AP46776 148 aaKnown RBP11.43□□□□□ -0.58
USB1-203ENST00000539737 INPP1P49441 399 aa11.43□□□□□ -0.58
USB1-203ENST00000539737 ZNF585BQ52M93 769 aa11.43□□□□□ -0.58
USB1-203ENST00000539737 TRIQKQ629K1 86 aa11.43□□□□□ -0.58
USB1-203ENST00000539737 MRGPRFQ96AM1 343 aa11.43□□□□□ -0.58
USB1-203ENST00000539737 UPK2O00526 184 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 ATG12O94817 140 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 BRI3O95415 125 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 ZP3P21754 424 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 DEFA5Q01523 94 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 ZNF45Q02386 682 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 SLC25A42Q86VD7 318 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 TSC22D3Q99576 134 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 BATF3Q9NR55 127 aa11.42□□□□□ -0.58
USB1-203ENST00000539737 C3orf85A0A1B0GTC6 90 aa11.41□□□□□ -0.58
USB1-203ENST00000539737 KRASP01116 189 aa11.41□□□□□ -0.58
USB1-203ENST00000539737 IL6RP08887 468 aaPredicted RBP11.41□□□□□ -0.58
USB1-203ENST00000539737 OR9G9P0C7N8 305 aa11.41□□□□□ -0.58
USB1-203ENST00000539737 G6PCP35575 357 aa11.41□□□□□ -0.58
USB1-203ENST00000539737 ZNF57Q68EA5 555 aaPredicted RBP11.41□□□□□ -0.58
USB1-203ENST00000539737 THOC7Q6I9Y2 204 aaKnown RBP11.41□□□□□ -0.58
USB1-203ENST00000539737 ACSM6Q6P461 480 aa11.41□□□□□ -0.58
USB1-203ENST00000539737 LINC00299Q6ZSB3 139 aa11.41□□□□□ -0.58
USB1-203ENST00000539737 OR5T1Q8NG75 326 aa11.41□□□□□ -0.58
USB1-203ENST00000539737 FYTTD1Q96QD9 318 aaKnown RBP11.41□□□□□ -0.58
USB1-203ENST00000539737 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
USB1-203ENST00000539737 RANGRFQ9HD47 186 aaPredicted RBP11.41□□□□□ -0.58
USB1-203ENST00000539737 COA4Q9NYJ1 87 aa11.41□□□□□ -0.58
USB1-203ENST00000539737 TEX13DA0A0J9YY54 714 aaPredicted RBP11.4□□□□□ -0.58
USB1-203ENST00000539737 TEX22C9J3V5 150 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 SNAPC5O75971 98 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 APELAP0DMC3 54 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 TATDN3Q17R31 274 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 TRIM16LQ309B1 348 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 CNPY1Q3B7I2 92 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 ADAD2Q8NCV1 583 aaKnown RBP11.4□□□□□ -0.58
USB1-203ENST00000539737 TP53RKQ96S44 253 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 SRSF8Q9BRL6 282 aaKnown RBP11.4□□□□□ -0.58
USB1-203ENST00000539737 C5orf66Q9H5L9 145 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 NAA60Q9H7X0 242 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 C19orf73Q9NVV2 129 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 PRNDQ9UKY0 176 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 GPR132Q9UNW8 380 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 ZNF257Q9Y2Q1 563 aa11.4□□□□□ -0.58
USB1-203ENST00000539737 NPIPB5A8MRT5 1133 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 DHFRP00374 187 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 UCP1P25874 307 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 OR2B8PP59922 312 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 HAGHQ16775 308 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 H2BFWTQ7Z2G1 175 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 HSD17B13Q7Z5P4 300 aaPredicted RBP11.39□□□□□ -0.59
USB1-203ENST00000539737 TTC9CQ8N5M4 171 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 SEC22AQ96IW7 307 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 RTBDNQ9BSG5 229 aaPredicted RBP11.39□□□□□ -0.59
USB1-203ENST00000539737 QTRT1Q9BXR0 403 aaKnown RBP11.39□□□□□ -0.59
USB1-203ENST00000539737 FKBP11Q9NYL4 201 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 PTTG2Q9NZH5 202 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 HERC2O95714 4834 aa11.39□□□□□ -0.59
USB1-203ENST00000539737 TRAV3A0A0B4J244 114 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 NAP1L6A6NFF2 107 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 CRYM-AS1A6NIL9 109 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 IGKV1-39P01597 117 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 IGKV1D-39P04432 117 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 AKR1C2P52895 323 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 DHODHQ02127 395 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 SGPP2Q8IWX5 399 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 OR5B3Q8NH48 314 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 USMG5Q96IX5 58 aa11.38□□□□□ -0.59
USB1-203ENST00000539737 SLC25A21Q9BQT8 299 aaPredicted RBP11.38□□□□□ -0.59
USB1-203ENST00000539737 HMX3A6NHT5 357 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 FAM223BA6NKX1 122 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 CENPXA8MT69 81 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 OR5AC1P0C628 307 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 BAK1Q16611 211 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 FAM223AQ8IWN6 122 aa11.37□□□□□ -0.59
USB1-203ENST00000539737 OR1L8Q8NGR8 309 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms