RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 ARV1Q9H2C2 271 aa8.21□□□□□ -1.1
CLPB-210ENST00000539148 CYTL1Q9NRR1 136 aa8.21□□□□□ -1.1
CLPB-210ENST00000539148 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
CLPB-210ENST00000539148 JMJD1CQ15652 2540 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 MARCH11A6NNE9 402 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 RRHO14718 337 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 HOXA3O43365 443 aaPredicted RBP8.2□□□□□ -1.1
CLPB-210ENST00000539148 KCNAB3O43448 404 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 SOX15O60248 233 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 PITX3O75364 302 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 MAS1LP35410 378 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 SULT1A2P50226 295 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 HILS1P60008 231 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 RPL30P62888 115 aaKnown RBP8.2□□□□□ -1.1
CLPB-210ENST00000539148 HBG1P69891 147 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 HBG2P69892 147 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 HNF4GQ14541 408 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 POU2AF1Q16633 256 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
CLPB-210ENST00000539148 LDLRAD2Q5SZI1 272 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 DPPA3Q6W0C5 159 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 MMD2Q8IY49 270 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 DYNAPQ8N1N2 210 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 NPBQ8NG41 125 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 C17orf50Q8WW18 174 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 GINS3Q9BRX5 216 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 SLC25A33Q9BSK2 321 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 SMDT1Q9H4I9 107 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 PARP11Q9NR21 331 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 BET1LQ9NYM9 111 aa8.2□□□□□ -1.1
CLPB-210ENST00000539148 NSD1Q96L73 2696 aaPredicted RBP8.2□□□□□ -1.1
CLPB-210ENST00000539148 A6NDX4 124 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 RBMXL2O75526 392 aaKnown RBP8.19□□□□□ -1.1
CLPB-210ENST00000539148 S1PR2O95136 353 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 KRASP01116 189 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 IGHV4-59P01825 116 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 IGKV1-16P04430 117 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 F2RL1P55085 397 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 RPP30P78346 268 aaKnown RBP8.19□□□□□ -1.1
CLPB-210ENST00000539148 TUSC1Q2TAM9 212 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 PPP1R27Q86WC6 154 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 FOXRED2Q8IWF2 684 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 LFNGQ8NES3 379 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 OR4A16Q8NH70 328 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 LHFPL5Q8TAF8 219 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 C5orf30Q96GV9 206 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 SMIM8Q96KF7 97 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 CLCC1Q96S66 551 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 PRSS22Q9GZN4 317 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 COMMD5Q9GZQ3 224 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.19□□□□□ -1.1
CLPB-210ENST00000539148 PRR13Q9NZ81 148 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 METTL1Q9UBP6 276 aaKnown RBP8.19□□□□□ -1.1
CLPB-210ENST00000539148 FBXL17Q9UF56 701 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 PRNDQ9UKY0 176 aa8.19□□□□□ -1.1
CLPB-210ENST00000539148 SYNGR2O43760 224 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 SLC25A17O43808 307 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 RAMP3O60896 148 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 KBTBD11O94819 623 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 NDUFA3O95167 84 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 IFNA5P01569 189 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 ATP5IP56385 69 aaPredicted RBP8.18□□□□□ -1.1
CLPB-210ENST00000539148 RAB2AP61019 212 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 EWSR1Q01844 656 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLPB-210ENST00000539148 TMEM267Q0VDI3 215 aaPredicted RBP8.18□□□□□ -1.1
CLPB-210ENST00000539148 PSG5Q15238 335 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 LY6EQ16553 131 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 ATP6V1FQ16864 119 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 C5orf64Q2M2E5 130 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 ZNF585BQ52M93 769 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 TOR2AQ5JU69 321 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 Q8N6K4 173 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 GPHA2Q96T91 129 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 PARD6GQ9BYG4 376 aaPredicted RBP8.18□□□□□ -1.1
CLPB-210ENST00000539148 HIPK2Q9H2X6 1198 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 C11orf1Q9H5F2 150 aa8.18□□□□□ -1.1
CLPB-210ENST00000539148 RCL1Q9Y2P8 373 aaKnown RBP8.18□□□□□ -1.1
CLPB-210ENST00000539148 MDFIC2A0A1B0GVS7 189 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 DNAJC9-AS1A6NH13 148 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 MSGN1A6NI15 193 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 ZNF705EA8MWA4 302 aaPredicted RBP8.17□□□□□ -1.1
CLPB-210ENST00000539148 CYB5BO43169 146 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 TSPAN9O75954 239 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 CNIH1O95406 144 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 HLA-DRB1P01911 266 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 RNASE1P07998 156 aaKnown RBP8.17□□□□□ -1.1
CLPB-210ENST00000539148 OR8U8P0C7N1 319 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 SAA1P0DJI8 122 aaPredicted RBP8.17□□□□□ -1.1
CLPB-210ENST00000539148 SPP1P10451 314 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 CD24P25063 80 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 G6PCP35575 357 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 SULT1A1P50225 295 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 CAV2P51636 162 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 RPL8P62917 257 aaKnown RBP8.17□□□□□ -1.1
CLPB-210ENST00000539148 RPL7L1Q6DKI1 246 aaKnown RBP8.17□□□□□ -1.1
CLPB-210ENST00000539148 OR4A47Q6IF82 309 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 TMEM252Q8N6L7 170 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 OR1S2Q8NGQ3 325 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 OR5B3Q8NH48 314 aa8.17□□□□□ -1.1
CLPB-210ENST00000539148 TMEM167AQ8TBQ9 72 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms