RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MKI67P46013 3256 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 MYOM2P54296 1465 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PKD1P98161 4303 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 MYH8P13535 1937 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CELSR3Q9NYQ7 3312 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 IGKV2D-24A0A075B6R9 120 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 A0A1W2PRE2 83 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF98A6NK75 572 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 A8MUU9 505 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 FAAHO00519 579 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 SSNA1O43805 119 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ORC5O43913 435 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 NDUFS5O43920 106 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 CCDC22O60826 627 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 PITX3O75364 302 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OR2J2O76002 312 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 LTAP01374 205 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 IL4P05112 153 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 CRYBA1P05813 215 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OR4A8P0C604 315 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 LINC00869P0C866 280 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 UCHL3P15374 230 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 BLVRBP30043 206 aaPredicted RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 CEBPGP53567 150 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 REEP5Q00765 189 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 PSG9Q00887 426 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ITGB3BPQ13352 177 aaPredicted RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 SSX1Q16384 188 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 KRTAP20-1Q3LI63 56 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 C1orf194Q5T5A4 169 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF684Q5T5D7 378 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OGFRL1Q5TC84 451 aaPredicted RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 WDR59Q6PJI9 974 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 CLEC19AQ6UXS0 136 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 S100A7AQ86SG5 101 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 KRTCAP2Q8N6L1 136 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF283Q8N7M2 679 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 NUP35Q8NFH5 326 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OR5H2Q8NGV7 314 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OR10A6Q8NH74 314 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 FAM57AQ8TBR7 257 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 PLA2G12AQ9BZM1 189 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 PARVBQ9HBI1 364 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 MED29Q9NX70 200 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 TRMT112Q9UI30 125 aaKnown RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF835Q9Y2P0 537 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 FAM32AQ9Y421 112 aaKnown RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 SORL1Q92673 2214 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 TJP1Q07157 1748 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 NOTCH2Q04721 2471 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 DUOX2Q9NRD8 1548 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZANQ9Y493 2812 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 NOTCH1P46531 2555 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ABCC12Q96J65 1359 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM2Q9UHN6 1383 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 MON2Q7Z3U7 1717 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 TRAV8-6A0A0B4J262 113 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 IGKV1-12A0A0C4DH73 117 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 FAM240AA0A1B0GVK7 77 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 IZUMO1RA6ND01 250 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OR5H1A6NKK0 313 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 CLDN24A6NM45 220 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 EVPLLA8MZ36 301 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 H3BP45 60 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 M0R1X1 148 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 IGKV1D-12P01611 117 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ISG15P05161 165 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 SEC11BP0C7V7 166 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 GABRA1P14867 456 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 GRPRP30550 384 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OR1E2P47887 323 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 DEFA6Q01524 100 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 EDDM3AQ14507 147 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF181Q2M3W8 571 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ELP2Q6IA86 826 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 LPCAT3Q6P1A2 487 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 TOMM20LQ6UXN7 152 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 HMGN2P46Q86SG4 172 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF709Q8N972 641 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 MAL2Q969L2 176 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 PPCDCQ96CD2 204 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 C14orf144Q96I85 54 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OR52B2Q96RD2 323 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 LINC00467Q9BRT7 94 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF2Q9BSG1 426 aaPredicted RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 GGACTQ9BVM4 153 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 C6orf62Q9GZU0 229 aaPredicted RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 PCBD2Q9H0N5 130 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ABCG5Q9H222 651 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 DCSTAMPQ9H295 470 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OR51I1Q9H343 314 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ACER3Q9NUN7 267 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF586Q9NXT0 402 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 RASL12Q9NYN1 266 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 DHCR7Q9UBM7 475 aaKnown RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 GUCA1BQ9UMX6 200 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 MCM3APO60318 1980 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 BAZ2BQ9UIF8 2168 aaKnown RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 TSC2P49815 1807 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms