RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CBX5P45973 191 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 WT1-ASQ06250 92 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 ZNF585BQ52M93 769 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 THOC7Q6I9Y2 204 aaKnown RBP9.33□□□□□ -0.92
VAMP1-206ENST00000538970 PLET1Q6UQ28 207 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 RBPMS2Q6ZRY4 209 aaKnown RBP9.33□□□□□ -0.92
VAMP1-206ENST00000538970 GDPD1Q8N9F7 314 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 DMBX1Q8NFW5 382 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 OR10W1Q8NGF6 305 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 OR1L6Q8NGR2 347 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 CD300LFQ8TDQ1 290 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 VN1R17PQ8TDU5 208 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 TMEM190Q8WZ59 177 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 DIABLOQ9NR28 239 aa9.33□□□□□ -0.92
VAMP1-206ENST00000538970 RPA2P15927 270 aa9.32□□□□□ -0.92
VAMP1-206ENST00000538970 GNRHRP30968 328 aa9.32□□□□□ -0.92
VAMP1-206ENST00000538970 HERV-K104P61576 105 aa9.32□□□□□ -0.92
VAMP1-206ENST00000538970 HSD17B13Q7Z5P4 300 aaPredicted RBP9.32□□□□□ -0.92
VAMP1-206ENST00000538970 BORCS5Q969J3 196 aa9.32□□□□□ -0.92
VAMP1-206ENST00000538970 SPAG8Q99932 426 aaPredicted RBP9.32□□□□□ -0.92
VAMP1-206ENST00000538970 C5orf66Q9H5L9 145 aa9.32□□□□□ -0.92
VAMP1-206ENST00000538970 TEX50A0A1B0GTY4 177 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 OR2T8A6NH00 312 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 MARCH11A6NNE9 402 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 CYB5BO43169 146 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 XRCC3O43542 346 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 TMEM127O75204 238 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 RLN1P04808 185 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 SERPINE2P07093 398 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 TRAPPC2P0DI81 140 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 TRAPPC2BP0DI82 140 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 OR13C7P0DN81 318 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 NEDD8Q15843 81 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 OR2C3Q8N628 320 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 LSM10Q969L4 123 aaKnown RBP9.31□□□□□ -0.92
VAMP1-206ENST00000538970 MOB3AQ96BX8 217 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 BSCL2Q96G97 398 aaPredicted RBP9.31□□□□□ -0.92
VAMP1-206ENST00000538970 IFT46Q9NQC8 304 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 DAZ1Q9NQZ3 744 aaKnown RBP9.31□□□□□ -0.92
VAMP1-206ENST00000538970 EHFQ9NZC4 300 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 ANAPC10Q9UM13 185 aa9.31□□□□□ -0.92
VAMP1-206ENST00000538970 TSPAN4O14817 238 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 F2RP25116 425 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 MFAP2P55001 183 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 ERVK-16P61578 105 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 DHRS11Q6UWP2 260 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 WFDC3Q8IUB2 231 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 SLC38A6Q8IZM9 456 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 LINC00476Q8WZB0 136 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 ATP6V0BQ99437 205 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 ZNF2Q9BSG1 426 aaPredicted RBP9.3□□□□□ -0.92
VAMP1-206ENST00000538970 FXYD6Q9H0Q3 95 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 NDUFA4L2Q9NRX3 87 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 UBQLN2Q9UHD9 624 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 TP53TG1Q9Y2A0 90 aa9.3□□□□□ -0.92
VAMP1-206ENST00000538970 F11RQ9Y624 299 aaKnown RBP9.3□□□□□ -0.92
VAMP1-206ENST00000538970 IGHV3-21A0A0B4J1V1 117 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 A0A0J9YWU9 116 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 F8W735 103 aaPredicted RBP9.29□□□□□ -0.92
VAMP1-206ENST00000538970 NDUFA4O00483 81 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 PGLYRP1O75594 196 aaPredicted RBP9.29□□□□□ -0.92
VAMP1-206ENST00000538970 TGFBR1P36897 503 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 RFX2P48378 723 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 APOC4P55056 127 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 ODF3L2Q3SX64 289 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 UBE2NLQ5JXB2 153 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 SLC25A24Q6NUK1 477 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 SPSB3Q6PJ21 355 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 Q6ZWC4 215 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 CADM3Q8N126 398 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 SCARB1Q8WTV0 552 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 FCAMRQ8WWV6 532 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 S100A16Q96FQ6 103 aaKnown RBP9.29□□□□□ -0.92
VAMP1-206ENST00000538970 CHRDL1Q9BU40 450 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 C21orf62Q9NYP8 219 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 NSG2Q9Y328 171 aa9.29□□□□□ -0.92
VAMP1-206ENST00000538970 CXorf65A6NEN9 183 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 K7EIM0 57 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 KRASP01116 189 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 PMP2P02689 132 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 NAT1P18440 290 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 BMI1P35226 326 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 ADMP35318 185 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 G6PCP35575 357 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 LPAR6P43657 344 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 TAS2R46P59540 309 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 TAS2R20P59543 309 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 EWSR1Q01844 656 aaKnown RBP eCLIP9.28□□□□□ -0.92
VAMP1-206ENST00000538970 TNFRSF9Q07011 255 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 PMS2P11Q13670 270 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 DEFB135Q30KP9 77 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 KCTD21Q4G0X4 260 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 TMEM69Q5SWH9 247 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 LYG2Q86SG7 212 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 CROCCP3Q8IVE0 287 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 OR5H2Q8NGV7 314 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 DGCR14Q96DF8 476 aaKnown RBP9.28□□□□□ -0.92
VAMP1-206ENST00000538970 ZNF414Q96IQ9 312 aa9.28□□□□□ -0.92
VAMP1-206ENST00000538970 HINT2Q9BX68 163 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms