RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 SEC22AQ96IW7 307 aa9.78□□□□□ -0.84
CLSTN3-208ENST00000538933 RBM14Q96PK6 669 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-208ENST00000538933 RCHY1Q96PM5 261 aa9.78□□□□□ -0.84
CLSTN3-208ENST00000538933 CLCC1Q96S66 551 aa9.78□□□□□ -0.84
CLSTN3-208ENST00000538933 MCRIP2Q9BUT9 160 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-208ENST00000538933 FBXL15Q9H469 300 aa9.78□□□□□ -0.84
CLSTN3-208ENST00000538933 ZMAT5Q9UDW3 170 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-208ENST00000538933 TNCP24821 2201 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 M0QZK8 103 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 KBTBD11O94819 623 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 IGKV1-5P01602 117 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 SULT1A3P0DMM9 295 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 SULT1A4P0DMN0 295 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 F2RL1P55085 397 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 GNB1P62873 340 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 ARSJQ5FYB0 599 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 MMD2Q8IY49 270 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 TEX45Q8NA69 505 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 RITA1Q96K30 269 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 PRR25Q96S07 402 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 BET1LQ9NYM9 111 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 CACNG5Q9UF02 275 aa9.77□□□□□ -0.85
CLSTN3-208ENST00000538933 SRRM4A7MD48 611 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 CNIH1O95406 144 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 IGLV2-23P01705 113 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 SMCO1Q147U7 214 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 TNXAQ16473 311 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 POU2AF1Q16633 256 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 C5orf64Q2M2E5 130 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 IAH1Q2TAA2 248 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 C9orf152Q5JTZ5 239 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 ZFAND6Q6FIF0 208 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 ADAMTSL5Q6ZMM2 481 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 PPP1R27Q86WC6 154 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 NPBQ8NG41 125 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 TMEM167AQ8TBQ9 72 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 ABHD5Q8WTS1 349 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 GPR146Q96CH1 333 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 COMMD5Q9GZQ3 224 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 FKBP11Q9NYL4 201 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 GSKIPQ9P0R6 139 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 PRNDQ9UKY0 176 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 NSG2Q9Y328 171 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 SORL1Q92673 2214 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 ALMS1Q8TCU4 4167 aa9.76□□□□□ -0.85
CLSTN3-208ENST00000538933 A0A1B0GU03 582 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 DBX1A6NMT0 343 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 WRBO00258 174 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 UPK2O00526 184 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 FGF16O43320 207 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 NDUFA3O95167 84 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 SIX6O95475 246 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 SCGB1D2O95969 90 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 IFNA17P01571 189 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 OR9G9P0C7N8 305 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 OR2B8PP59922 312 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 RPL8P62917 257 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 FCN2Q15485 313 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 IZUMO4Q1ZYL8 232 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 NMSQ5H8A3 153 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 SBSPONQ8IVN8 264 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 PUSL1Q8N0Z8 303 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 Q8N6K4 173 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 OR5M8Q8NGP6 311 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 C2orf50Q96LR7 162 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 P2RX4Q99571 388 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 HINT2Q9BX68 163 aa9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-208ENST00000538933 TRAV3A0A0B4J244 114 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 A0A0G2JRQ6 117 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 NXPH3O95157 252 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 CA2P00918 260 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 SLC25A6P12236 298 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 HLA-GP17693 338 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 MAS1LP35410 378 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 CYCSP99999 105 aaKnown RBP9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 C18orf65Q6ZTR6 163 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 Q8N9W7 124 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 OR4X2Q8NGF9 303 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 ZNF430Q9H8G1 570 aaPredicted RBP9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 ENY2Q9NPA8 101 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 TPSG1Q9NRR2 321 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 CACFD1Q9UGQ2 172 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 OR51B2Q9Y5P1 312 aa9.74□□□□□ -0.85
CLSTN3-208ENST00000538933 A0A1B0GVG6 124 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 HMX3A6NHT5 357 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 C15orf61A6NNL5 157 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 MPTX1A8MV57 137 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 MED6O75586 246 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 AMY1AP04745 511 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 FGF2P09038 288 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 RPL27AP46776 148 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 BCAP31P51572 246 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 S100A10P60903 97 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 PRSS8Q16651 343 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 FOXRED2Q8IWF2 684 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 CADM3Q8N126 398 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 FAM71E2Q8N5Q1 922 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 C5orf56Q8N8D9 126 aa9.73□□□□□ -0.85
CLSTN3-208ENST00000538933 ZBTB8BQ8NAP8 495 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms