RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TAF1LQ8IZX4 1826 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 CXorf65A6NEN9 183 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 METRNQ9UJH8 293 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 GVINP1Q7Z2Y8 2422 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 IGKV1D-43A0A0B4J1Z2 117 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 IGHV3-11P01762 117 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 SLC25A34Q6PIV7 304 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 WDR82Q6UXN9 313 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 TDRD6O60522 2096 aaKnown RBP14.17□□□□□ -0.14
SCARB1-205ENST00000538291 C17orf98A8MV24 154 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 TGFBR3LH3BV60 316 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 KIAA1644Q3SXP7 199 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 GCSAMLQ5JQS6 135 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 NPCDR1Q9BY65 106 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 IGLV3-12A0A075B6K2 115 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 PUSL1Q8N0Z8 303 aaKnown RBP14.16□□□□□ -0.14
SCARB1-205ENST00000538291 GAGE10A6NGK3 116 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 DNAL4O96015 105 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 H2BFSP57053 126 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 MYO16Q9Y6X6 1858 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 TRGV2A0A075B6R0 118 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 LHX2P50458 406 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 RNASEH2CQ8TDP1 164 aaKnown RBP14.16□□□□□ -0.14
SCARB1-205ENST00000538291 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.16□□□□□ -0.14
SCARB1-205ENST00000538291 E9PLN8 166 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 CELA3BP08861 270 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 SPACA3Q8IXA5 215 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 VKORC1Q9BQB6 163 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 TGIF2-C20orf24A0A0A6YYL0 155 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 TMEM250H0YL14 139 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 K7ERU9 68 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 NBR2O15453 112 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 BRWD3Q6RI45 1802 aa14.16□□□□□ -0.14
SCARB1-205ENST00000538291 EP300Q09472 2414 aaPredicted RBP14.15□□□□□ -0.14
SCARB1-205ENST00000538291 LOC102723996A0A087X1L8 192 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 OTX1P32242 354 aaPredicted RBP14.15□□□□□ -0.14
SCARB1-205ENST00000538291 CACNG8Q8WXS5 425 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 MSGN1A6NI15 193 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 IGFBP2P18065 325 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 WNT10AQ9GZT5 417 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 THBDP07204 575 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 EMP1P54849 157 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 TMEM170BQ5T4T1 132 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 ANKRD31Q8N7Z5 1873 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 OR52E5Q8NH55 327 aa14.15□□□□□ -0.14
SCARB1-205ENST00000538291 RGPD3A6NKT7 1758 aaPredicted RBP14.14□□□□□ -0.15
SCARB1-205ENST00000538291 OR11H12B2RN74 326 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 PROB1E7EW31 1015 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 REC114Q7Z4M0 266 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 OR11H1Q8NG94 326 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 OR11H2Q8NH07 326 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 C2orf88Q9BSF0 95 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 PLSCR2Q9NRY7 297 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 RPRMQ9NS64 109 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 UQCR10Q9UDW1 63 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 PAX1P15863 534 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 UCP1P25874 307 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 PRELID3AQ96N28 172 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 LY6DQ14210 128 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 CACNA1GO43497 2377 aa14.14□□□□□ -0.15
SCARB1-205ENST00000538291 A0A0G2JK05 382 aa14.13□□□□□ -0.15
SCARB1-205ENST00000538291 SDF2L1Q9HCN8 221 aa14.13□□□□□ -0.15
SCARB1-205ENST00000538291 CCL3L1P16619 93 aa14.13□□□□□ -0.15
SCARB1-205ENST00000538291 ZFC3H1O60293 1989 aaKnown RBP14.13□□□□□ -0.15
SCARB1-205ENST00000538291 IGHV3OR16-8A0A075B7F1 116 aa14.13□□□□□ -0.15
SCARB1-205ENST00000538291 VENTXO95231 258 aa14.13□□□□□ -0.15
SCARB1-205ENST00000538291 COTL1Q14019 142 aa14.13□□□□□ -0.15
SCARB1-205ENST00000538291 MARVELD3Q96A59 401 aa14.13□□□□□ -0.15
SCARB1-205ENST00000538291 ZNF837Q96EG3 531 aaPredicted RBP14.13□□□□□ -0.15
SCARB1-205ENST00000538291 F11RQ9Y624 299 aaKnown RBP14.13□□□□□ -0.15
SCARB1-205ENST00000538291 RTTNQ86VV8 2226 aa14.13□□□□□ -0.15
SCARB1-205ENST00000538291 CGAP01215 116 aa14.13□□□□□ -0.15
SCARB1-205ENST00000538291 PEX7O00628 323 aa14.12□□□□□ -0.15
SCARB1-205ENST00000538291 C8orf46Q8TAG6 207 aa14.12□□□□□ -0.15
SCARB1-205ENST00000538291 RCC1LQ96I51 464 aaKnown RBP14.12□□□□□ -0.15
SCARB1-205ENST00000538291 CKAP5Q14008 2032 aa14.12□□□□□ -0.15
SCARB1-205ENST00000538291 EGR1P18146 543 aa14.12□□□□□ -0.15
SCARB1-205ENST00000538291 CDX1P47902 265 aaPredicted RBP14.12□□□□□ -0.15
SCARB1-205ENST00000538291 STHQ8IWL8 128 aa14.12□□□□□ -0.15
SCARB1-205ENST00000538291 PQLC2LA1A4F0 135 aa14.12□□□□□ -0.15
SCARB1-205ENST00000538291 H3BRM9 83 aa14.12□□□□□ -0.15
SCARB1-205ENST00000538291 RNASE4P34096 147 aaKnown RBP14.12□□□□□ -0.15
SCARB1-205ENST00000538291 ZFP36L1Q07352 338 aaKnown RBP14.12□□□□□ -0.15
SCARB1-205ENST00000538291 TMEM133Q9H2Q1 129 aa14.12□□□□□ -0.15
SCARB1-205ENST00000538291 BIVMQ86UB2 503 aa14.12□□□□□ -0.15
SCARB1-205ENST00000538291 FHITP49789 147 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 FMC1Q96HJ9 113 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 NRXN2Q9P2S2 1712 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 ZNF385CQ66K41 422 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-205ENST00000538291 CSRP3P50461 194 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 CIARTQ8N365 385 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-205ENST00000538291 DMRTA2Q96SC8 542 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 TMEM160Q9NX00 188 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 FAM209BQ5JX69 171 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 LDLRAD2Q5SZI1 272 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 TMEM136Q6ZRR5 245 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 OR11H4Q8NGC9 324 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 ZNF414Q96IQ9 312 aa14.11□□□□□ -0.15
SCARB1-205ENST00000538291 SAA1P0DJI8 122 aaPredicted RBP14.1□□□□□ -0.15
SCARB1-205ENST00000538291 WBP1Q96G27 269 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms