RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 TNFSF15O95150 251 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 SCNM1Q9BWG6 230 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 SDF2L1Q9HCN8 221 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 PRRC2CQ9Y520 2896 aaKnown RBP4.86□□□□□ -1.63
CSMD1-215ENST00000537824 ATP5IP56385 69 aaPredicted RBP4.86□□□□□ -1.63
CSMD1-215ENST00000537824 LRRC75BQ2VPJ9 315 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 EAF1Q96JC9 268 aaPredicted RBP4.86□□□□□ -1.63
CSMD1-215ENST00000537824 ATP6V0BQ99437 205 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 VKORC1Q9BQB6 163 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 IL2RAP01589 272 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 NXPH1P58417 271 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 DLX4Q92988 240 aaPredicted RBP4.86□□□□□ -1.63
CSMD1-215ENST00000537824 GPR82Q96P67 336 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 SHISA7A6NL88 538 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 HRKO00198 91 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 RNFT1Q5M7Z0 435 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 C1orf174Q8IYL3 243 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 MRAPQ8TCY5 172 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 WFDC1Q9HC57 220 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 MOB4Q9Y3A3 225 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 A0A1B0GWJ7 208 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 AZU1P20160 251 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 TBR1Q16650 682 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 C9orf153Q5TBE3 101 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 RNF222A6NCQ9 220 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 CGB1A6NKQ9 187 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 DLL1O00548 723 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 SYNGR1O43759 233 aa4.86□□□□□ -1.63
CSMD1-215ENST00000537824 PSG3Q16557 428 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 HCP5Q6MZN7 132 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 ZAR1Q86SH2 424 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 SLX1AQ9BQ83 275 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 PRSS27Q9BQR3 290 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 HS3ST3B1Q9Y662 390 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 PIN1P1O15428 100 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 C1orf100Q5SVJ3 147 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 TSSC4Q9Y5U2 329 aaPredicted RBP4.85□□□□□ -1.63
CSMD1-215ENST00000537824 TRAV30A0A087WSZ9 112 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 LOC101059948A0A1B0GTJ6 334 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 C17orf51A8MQB3 221 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 FGF16O43320 207 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 TNFRSF6BO95407 300 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 CLDN14O95500 239 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 CEACAM5P06731 702 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 C8orf88P0DMB2 117 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 VKORC1L1Q8N0U8 176 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 ZADH2Q8N4Q0 377 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 BGLAPP02818 100 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 C1QTNF9P0C862 333 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 CDKN1AP38936 164 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 VSTM2LQ96N03 204 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 RNASE7Q9H1E1 156 aaKnown RBP4.85□□□□□ -1.63
CSMD1-215ENST00000537824 J3QT63 122 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 LAMTOR5O43504 91 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 LIMS1P48059 325 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 DSCR4P56555 118 aaPredicted RBP4.85□□□□□ -1.63
CSMD1-215ENST00000537824 PAX2Q02962 417 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 MEIG1Q5JSS6 88 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 SYT8Q8NBV8 401 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 TMUB1Q9BVT8 246 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 IGF2RP11717 2491 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 A0A0G2JK05 382 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 PGPA6NDG6 321 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 HIGD1CA8MV81 97 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 CX3CL1P78423 397 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 LY6G6FQ5SQ64 297 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 OR9G4Q8NGQ1 327 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 FOXB1Q99853 325 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 CRISPLD2Q9H0B8 497 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 TNFRSF19Q9NS68 423 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 TNFSF14O43557 240 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 MPZP25189 248 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 SRSF5Q13243 272 aaKnown RBP4.85□□□□□ -1.63
CSMD1-215ENST00000537824 C10orf128Q5T292 105 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 BOD1L2Q8IYS8 172 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 HEXA-AS1Q9H8Q6 139 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 CDX4O14627 284 aaPredicted RBP4.85□□□□□ -1.63
CSMD1-215ENST00000537824 IGHV2-70P01814 119 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 PRTN3P24158 256 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 HSPE1P61604 102 aaKnown RBP4.85□□□□□ -1.63
CSMD1-215ENST00000537824 CCL20P78556 96 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 GAGE1Q13065 139 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 C6orf15Q6UXA7 325 aaPredicted RBP4.85□□□□□ -1.63
CSMD1-215ENST00000537824 BADQ92934 168 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 SS18L2Q9UHA2 77 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 TRBV20OR9-2A0A075B6H5 130 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 OR51G1Q8NGK1 321 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 PLPPR1Q8TBJ4 325 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 TM4SF19Q96DZ7 209 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 ZNF488Q96MN9 340 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 RNF126Q9BV68 326 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 OR10J6PQ8NGY7 276 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 REG1AP05451 166 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 REG1BP48304 166 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 LRTM2Q8N967 370 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 NFAM1Q8NET5 270 aaPredicted RBP4.85□□□□□ -1.63
CSMD1-215ENST00000537824 AMELYQ99218 206 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 MGST2Q99735 147 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 NPVFQ9HCQ7 196 aa4.85□□□□□ -1.63
CSMD1-215ENST00000537824 COL18A1P39060 1754 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms