RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 SPATA25Q9BR10 227 aa10.79□□□□□ -0.68
RTN3P1-201ENST00000536295 SLC2A8Q9NY64 477 aa10.79□□□□□ -0.68
RTN3P1-201ENST00000536295 KLK9Q9UKQ9 250 aa10.79□□□□□ -0.68
RTN3P1-201ENST00000536295 FAM25AB3EWG3 89 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 FAM25CB3EWG5 89 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 FAM25GB3EWG6 89 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 TPPPO94811 219 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 LYL1P12980 280 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 RORCP51449 518 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 WT1-ASQ06250 92 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 ZNF585BQ52M93 769 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 SLC25A24Q6NUK1 477 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 DEFB125Q8N687 156 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 OR1L8Q8NGR8 309 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 CMTM3Q96MX0 182 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 CITED4Q96RK1 184 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 SRSF8Q9BRL6 282 aaKnown RBP10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 NAA50Q9GZZ1 169 aaKnown RBP10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 WFDC10AQ9H1F0 79 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 SCPEP1Q9HB40 452 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 PALMDQ9NP74 551 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 TECRQ9NZ01 308 aaKnown RBP10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 THYN1Q9P016 225 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 OR51B2Q9Y5P1 312 aa10.78□□□□□ -0.68
RTN3P1-201ENST00000536295 IGHV3-21A0A0B4J1V1 117 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 TMEM213A2RRL7 107 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 CYB5BO43169 146 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 SNAPC5O75971 98 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 SERPINE2P07093 398 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 FGF2P09038 288 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 S100GP29377 79 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 RCVRNP35243 200 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 TM4SF20Q53R12 229 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 PLET1Q6UQ28 207 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 TBC1D26Q86UD7 250 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 LAX1Q8IWV1 398 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 GDPD1Q8N9F7 314 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 UXS1Q8NBZ7 420 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 ZNF502Q8TBZ5 544 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 RETNQ9HD89 108 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 MLXQ9UH92 298 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 CEPT1Q9Y6K0 416 aa10.77□□□□□ -0.69
RTN3P1-201ENST00000536295 A8MWP6 167 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 M0QYG6 137 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 SMIM18P0DKX4 95 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 PTBP1P26599 531 aaKnown RBP eCLIP10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 ZNF57Q68EA5 555 aaPredicted RBP10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 ZFAND6Q6FIF0 208 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 THOC7Q6I9Y2 204 aaKnown RBP10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 LPCAT3Q6P1A2 487 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 MZT2AQ6P582 158 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 TMEM61Q8N0U2 210 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 LSM10Q969L4 123 aaKnown RBP10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 ISOC1Q96CN7 298 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 SRD5A3Q9H8P0 318 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 NDUFA4L2Q9NRX3 87 aa10.76□□□□□ -0.69
RTN3P1-201ENST00000536295 OR2T8A6NH00 312 aa10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 OR11H12B2RN74 326 aa10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 SCAF4O95104 1147 aaKnown RBP10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 MFAP2P55001 183 aa10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 GPR107Q5VW38 600 aa10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 BTNL8Q6UX41 500 aa10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 HSD17B13Q7Z5P4 300 aaPredicted RBP10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 VN1R17PQ8TDU5 208 aa10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 AP3S1Q92572 193 aa10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 EDA2RQ9HAV5 297 aa10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 PRNDQ9UKY0 176 aa10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 F11RQ9Y624 299 aaKnown RBP10.75□□□□□ -0.69
RTN3P1-201ENST00000536295 DBX1A6NMT0 343 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 TGOLN2O43493 480 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 GABARAPO95166 117 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 IFNA6P05013 189 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 CTF1Q16619 201 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 SLC16A13Q7RTY0 426 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 SLC38A6Q8IZM9 456 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 UBAC2Q8NBM4 344 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 TMEM56Q96MV1 263 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 FAM110AQ9BQ89 295 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 EXTL2Q9UBQ6 330 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 KLK11Q9UBX7 282 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 UFC1Q9Y3C8 167 aa10.74□□□□□ -0.69
RTN3P1-201ENST00000536295 RBMY1BA6NDE4 496 aaKnown RBP10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 RBMY1EA6NEQ0 496 aaKnown RBP10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 C15orf61A6NNL5 157 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 IGKV1-39P01597 117 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 IGKV1D-39P04432 117 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 RBMY1DP0C7P1 496 aaKnown RBP10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 PGAM2P15259 253 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 ZNF182P17025 639 aaPredicted RBP10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 PI3P19957 117 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 UCP3P55916 312 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 LINC00322Q6ZN03 302 aaPredicted RBP10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 H2BFWTQ7Z2G1 175 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 OR52B4Q8NGK2 314 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 OR5B3Q8NH48 314 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 OR52I2Q8NH67 350 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 OR4A16Q8NH70 328 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 MRGPRFQ96AM1 343 aa10.73□□□□□ -0.69
RTN3P1-201ENST00000536295 TSC22D3Q99576 134 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms