RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 CDNFQ49AH0 187 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 Q56UQ5 140 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 ZNF66Q6ZN08 573 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 LINC00336Q6ZUF6 198 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 GBGT1Q8N5D6 347 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 DMBX1Q8NFW5 382 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 OR10W1Q8NGF6 305 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 NUDCD2Q8WVJ2 157 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 SECTM1Q8WVN6 248 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 CMTM3Q96MX0 182 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 HINT2Q9BX68 163 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 QTRT1Q9BXR0 403 aaKnown RBP5.9□□□□□ -1.46
CHFR-211ENST00000535897 CCDC90BQ9GZT6 254 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 ACOT13Q9NPJ3 140 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 BET1LQ9NYM9 111 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 KLK9Q9UKQ9 250 aa5.9□□□□□ -1.46
CHFR-211ENST00000535897 DNAH2Q9P225 4427 aa5.9□□□□□ -1.47
CHFR-211ENST00000535897 TRAV3A0A0B4J244 114 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 C11orf94C9JXX5 98 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 SULT1C2O00338 296 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 MRPS14O60783 128 aaKnown RBP5.89□□□□□ -1.47
CHFR-211ENST00000535897 MED14OSP0DP75 135 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 NQO2P16083 231 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 MYL9P24844 172 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 ADMP35318 185 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 BRWD1-AS2P59051 145 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 TAS2R31P59538 309 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 GNG2P59768 71 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 ARPC4P59998 168 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 MLLT11Q13015 90 aaPredicted RBP5.89□□□□□ -1.47
CHFR-211ENST00000535897 CATR1Q13166 79 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 HACD4Q5VWC8 232 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 CNIH2Q6PI25 160 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 SPSB3Q6PJ21 355 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 IZUMO2Q6UXV1 221 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 GVQW1Q8N7I0 195 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 GDPD1Q8N9F7 314 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 RNF2Q99496 336 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 CHRDL1Q9BU40 450 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 RHPN1-AS1Q9BWJ2 59 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 CCL28Q9NRJ3 127 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 TMEM140Q9NV12 185 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 C21orf62Q9NYP8 219 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 ANXA10Q9UJ72 324 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 APLNQ9ULZ1 77 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 TPRKBQ9Y3C4 175 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 ABCA13Q86UQ4 5058 aa5.89□□□□□ -1.47
CHFR-211ENST00000535897 IGHV3OR16-13A0A075B7E8 117 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 IGHV3-74A0A0B4J1X5 117 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 IGHV7-4-1A0A0J9YVY3 117 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 TMEM235A6NFC5 223 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 C15orf62A8K5M9 175 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 K7EMT4 169 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 UPK2O00526 184 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 RGS10O43665 173 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 SERPINE2P07093 398 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 TRAPPC2P0DI81 140 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 TRAPPC2BP0DI82 140 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 RAB3BP20337 219 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 FCGR2CP31995 323 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 AQP4P55087 323 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 PAFAH1B2P68402 229 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 EIF4EBP1Q13541 118 aaPredicted RBP5.88□□□□□ -1.47
CHFR-211ENST00000535897 IRF3Q14653 427 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 NR2C2APQ86WQ0 139 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 TMEM116Q8NCL8 245 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 OR13F1Q8NGS4 319 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 NRG4Q8WWG1 115 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 MGLLQ99685 303 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 SRSF8Q9BRL6 282 aaKnown RBP5.88□□□□□ -1.47
CHFR-211ENST00000535897 DCSTAMPQ9H295 470 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 SMPXQ9UHP9 88 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 RAB26Q9ULW5 256 aa5.88□□□□□ -1.47
CHFR-211ENST00000535897 IGHV4-4A0A075B6R2 117 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 TRAV1-2A0A0B4J238 106 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 SMIM30A4D0T7 59 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 PRSS29PA6NIE9 313 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 CHEK1O14757 476 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 NUPL2O15504 423 aaKnown RBP5.87□□□□□ -1.47
CHFR-211ENST00000535897 RBFOX2O43251 390 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHFR-211ENST00000535897 HPRT1P00492 218 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 EIF4EP06730 217 aaKnown RBP5.87□□□□□ -1.47
CHFR-211ENST00000535897 HLA-DMBP28068 263 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 FXYD4P59646 89 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 ERVK-16P61578 105 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 RPL11P62913 178 aaKnown RBP5.87□□□□□ -1.47
CHFR-211ENST00000535897 RELQ04864 619 aaPredicted RBP5.87□□□□□ -1.47
CHFR-211ENST00000535897 WT1-ASQ06250 92 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 AADACL3Q5VUY0 350 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 LEMD1Q68G75 181 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 THOC7Q6I9Y2 204 aaKnown RBP5.87□□□□□ -1.47
CHFR-211ENST00000535897 HSD17B13Q7Z5P4 300 aaPredicted RBP5.87□□□□□ -1.47
CHFR-211ENST00000535897 OR51H1Q8NH63 302 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 SCARB1Q8WTV0 552 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 GIMAP1Q8WWP7 306 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 LSM10Q969L4 123 aaKnown RBP5.87□□□□□ -1.47
CHFR-211ENST00000535897 SLC5A7Q9GZV3 580 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 ETV7Q9Y603 341 aa5.87□□□□□ -1.47
CHFR-211ENST00000535897 F11RQ9Y624 299 aaKnown RBP5.87□□□□□ -1.47
CHFR-211ENST00000535897 DYNC1H1Q14204 4646 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms