RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, human

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPARCL1-208	ENST00000535835	SLC17A2	O00624	439 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	AGPAT2	O15120	278 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	EFNA2	O43921	213 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	RAMP1	O60894	148 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	DUSP14	O95147	198 aa	Known RBP	2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	IGHV4-39	P01824	125 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	PGA4	P0DJD7	388 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	PGA5	P0DJD9	388 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	FAM236C	P0DP71	79 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	FABP2	P12104	132 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	PIP	P12273	146 aa	Predicted RBP	2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	GP1BB	P13224	206 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	ZNF708	P17019	499 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	COX5A	P20674	150 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	BTC	P35070	178 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	HINT1	P49773	126 aa	Predicted RBP	2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	CRISP3	P54108	245 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	CLDN17	P56750	224 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	H2BFS	P57053	126 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	ZNF90	Q03938	601 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	PLPP4	Q5VZY2	271 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	ACP7	Q6ZNF0	438 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	TIFAB	Q6ZNK6	161 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	SHISA6	Q6ZSJ9	500 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	SLC25A42	Q86VD7	318 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	HOGA1	Q86XE5	327 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	C10orf111	Q8N326	155 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	SIGLECL1	Q8N7X8	197 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	ZFP41	Q8N8Y5	198 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	OR2T33	Q8NG76	320 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	OR10P1	Q8NGE3	313 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	C18orf32	Q8TCD1	76 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	NT5C	Q8TCD5	201 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	RPS4Y2	Q8TD47	263 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	TSACC	Q96A04	125 aa	Predicted RBP	2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	NEURL3	Q96EH8	262 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	GNPNAT1	Q96EK6	184 aa	Predicted RBP	2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	S100A16	Q96FQ6	103 aa	Known RBP	2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	PGLYRP3	Q96LB9	341 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	FAM173A	Q9BQD7	235 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	ZNF670	Q9BS34	389 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	C19orf24	Q9BVV8	132 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	MRPL20	Q9BYC9	149 aa	Known RBP	2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	GABARAPL1	Q9H0R8	117 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	IKZF5	Q9H5V7	419 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	TNS2	Q63HR2	1409 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	GLI3	P10071	1580 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	PIK3C2B	O00750	1634 aa		2.57	□□□□□ -2
SPARCL1-208	ENST00000535835	TSPOAP1	O95153	1857 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	TRAV9-2	A0A087WT02	112 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	TRAV8-6	A0A0B4J262	113 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	IGKV3D-20	A0A0C4DH25	116 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	LOC285095	A0A1B0GVY8	99 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	ODAM	A1E959	279 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	OR2T8	A6NH00	312 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	UMAD1	C9J7I0	102 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835		H3BMG7	143 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	LY6L	H3BQJ8	138 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	CCL21	O00585	134 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	CDX4	O14627	284 aa	Predicted RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	GEMIN2	O14893	280 aa	Known RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	NDUFB6	O95139	128 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	CXorf1	O96002	111 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	HSPB1	P04792	205 aa	Known RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	H1F0	P07305	194 aa	Known RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	CPM	P14384	443 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	LIF	P15018	202 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	GPX3	P22352	226 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	HLA-DMB	P28068	263 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	LPAR6	P43657	344 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	UBE2E1	P51965	193 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	PRDX1	Q06830	199 aa	Known RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	SLC38A11	Q08AI6	406 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	IL15RA	Q13261	267 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	EIF3I	Q13347	325 aa	Known RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	TGIF1	Q15583	401 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	MSMO1	Q15800	293 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	ZNF141	Q15928	474 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	C12orf74	Q32Q52	190 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	SPATA45	Q537H7	98 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835		Q56UQ5	140 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	FAM182A	Q5T1J6	154 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	ZNF57	Q68EA5	555 aa	Predicted RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	LCN12	Q6JVE5	192 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	DPPA3	Q6W0C5	159 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	ZNF497	Q6ZNH5	498 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	COX8C	Q7Z4L0	72 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	TRPT1	Q86TN4	253 aa	Known RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	LHFPL1	Q86WI0	220 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	RPS19BP1	Q86WX3	136 aa	Known RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	SGPP2	Q8IWX5	399 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	MSRB3	Q8IXL7	192 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	C3orf22	Q8N5N4	141 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	OR10AG1	Q8NH19	301 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	OTOS	Q8NHW6	89 aa		2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	SRSF12	Q8WXF0	261 aa	Known RBP	2.56	□□□□□ -2
SPARCL1-208	ENST00000535835	DLX4	Q92988	240 aa	Predicted RBP	2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms