RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SELENOHQ8IZQ5 122 aaKnown RBP9.42□□□□□ -0.9
CHD4-203ENST00000535717 OR5T1Q8NG75 326 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 CASTOR1Q8WTX7 329 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 TMEM56Q96MV1 263 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 FYTTD1Q96QD9 318 aaKnown RBP9.42□□□□□ -0.9
CHD4-203ENST00000535717 TSSC4Q9Y5U2 329 aaPredicted RBP9.42□□□□□ -0.9
CHD4-203ENST00000535717 TMEM56-RWDD3S4R434 201 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 A0A0G2JRQ6 117 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 DBX1A6NMT0 343 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 ATG12O94817 140 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 PF4V1P10720 104 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 VAMP1P23763 118 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 AKR1C2P52895 323 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 RPL23AP62750 156 aaKnown RBP9.41□□□□□ -0.9
CHD4-203ENST00000535717 PPP1R1AQ13522 171 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 CXorf66Q5JRM2 361 aaPredicted RBP9.41□□□□□ -0.9
CHD4-203ENST00000535717 KHDC1LQ5JSQ8 128 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 TMEM268Q5VZI3 342 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 TMEM65Q6PI78 240 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 ZNF695Q8IW36 515 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 OR5M8Q8NGP6 311 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 MYOZ3Q8TDC0 251 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 RBPMSQ93062 196 aaKnown RBP9.41□□□□□ -0.9
CHD4-203ENST00000535717 TMEM68Q96MH6 324 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 TMEM14BQ9NUH8 114 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 PRNDQ9UKY0 176 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 OR51B2Q9Y5P1 312 aa9.41□□□□□ -0.9
CHD4-203ENST00000535717 WNK1Q9H4A3 2382 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 A0A0B4J293 547 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 C15orf61A6NNL5 157 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 M0QZ24 198 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 SFT2D2O95562 160 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 TCRBP04435 133 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 ANXA3P12429 323 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 AREGP15514 252 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 ANXA7P20073 488 aaKnown RBP9.4□□□□□ -0.9
CHD4-203ENST00000535717 RAB9AP51151 201 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 UBE2MP61081 183 aaKnown RBP9.4□□□□□ -0.9
CHD4-203ENST00000535717 KIAA0141Q14154 515 aaPredicted RBP9.4□□□□□ -0.9
CHD4-203ENST00000535717 ANKRD55Q3KP44 614 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 TOR2AQ5JU69 321 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 C18orf65Q6ZTR6 163 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 TTC9CQ8N5M4 171 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 SLC35G3Q8N808 338 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 OR1L8Q8NGR8 309 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 OR4A16Q8NH70 328 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 FAM110DQ8TAY7 271 aaPredicted RBP9.4□□□□□ -0.9
CHD4-203ENST00000535717 IL22RA2Q969J5 263 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 RRNAD1Q96FB5 475 aaKnown RBP9.4□□□□□ -0.9
CHD4-203ENST00000535717 MS4A10Q96PG2 267 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 QTRT1Q9BXR0 403 aaKnown RBP9.4□□□□□ -0.9
CHD4-203ENST00000535717 C20orf85Q9H1P6 137 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 ZFP57Q9NU63 452 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 FKBP11Q9NYL4 201 aa9.4□□□□□ -0.9
CHD4-203ENST00000535717 CMYA5Q8N3K9 4069 aa9.4□□□□□ -0.91
CHD4-203ENST00000535717 FAM240BA0A1B0GVZ2 78 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 IGLC7A0M8Q6 106 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 C9orf170A2RU37 121 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 TSPAN15O95858 294 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 CDX1P47902 265 aaPredicted RBP9.39□□□□□ -0.91
CHD4-203ENST00000535717 SRPXP78539 464 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 C2orf68Q2NKX9 166 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 Q5BKY6 102 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 Q6ZRM9 215 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 LYZL2Q7Z4W2 148 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 NRARPQ7Z6K4 114 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 FAM219AQ8IW50 185 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 LGI3Q8N145 548 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 OR10W1Q8NGF6 305 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 RNASE11Q8TAA1 199 aaKnown RBP9.39□□□□□ -0.91
CHD4-203ENST00000535717 ENKURQ8TC29 256 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 LSM10Q969L4 123 aaKnown RBP9.39□□□□□ -0.91
CHD4-203ENST00000535717 NDUFA4L2Q9NRX3 87 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 ZNF355PQ9NSJ1 428 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 NUDT15Q9NV35 164 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 COA4Q9NYJ1 87 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 MGAM2Q2M2H8 2515 aa9.39□□□□□ -0.91
CHD4-203ENST00000535717 TRAV6A0A075B6T7 132 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 A0A0B4J2A0 478 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 NPIPB5A8MRT5 1133 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 H3BUA1 57 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 RBMXL2O75526 392 aaKnown RBP9.38□□□□□ -0.91
CHD4-203ENST00000535717 BRI3O95415 125 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
CHD4-203ENST00000535717 PRH1P02810 166 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 TRGV3P03979 118 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 REG1AP05451 166 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 OR4E1P0C645 316 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 PSMB6P28072 239 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 DHRS2Q13268 280 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 ZNF429Q86V71 674 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 ZNF491Q8N8L2 437 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 LRTM2Q8N967 370 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 KLHL30-AS1Q8NEE0 82 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 OR5B3Q8NH48 314 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 GPR146Q96CH1 333 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 UBE2E2Q96LR5 201 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms