RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 TMEM17Q86X19 198 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 CMTM1Q8IZ96 169 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 OR5H2Q8NGV7 314 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 OR6F1Q8NGZ6 308 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 OR51H1Q8NH63 302 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 MUC7Q8TAX7 377 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 EEF1AKMT3Q96AZ1 226 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 ZNF2Q9BSG1 426 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-202ENST00000535685 QTRT1Q9BXR0 403 aaKnown RBP8.16□□□□□ -1.1
CCDC60-202ENST00000535685 COMMD5Q9GZQ3 224 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 HRASLSQ9HDD0 168 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 TMEM140Q9NV12 185 aa8.16□□□□□ -1.1
CCDC60-202ENST00000535685 TRAV3A0A0B4J244 114 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 SMIM31A0A1B0GVY4 71 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 IZUMO1RA6ND01 250 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 MARCH11A6NNE9 402 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 ZNF785A8K8V0 405 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 PPP5D1E7EU14 171 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 GPR31O00270 319 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 OR2C1O95371 312 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 EIF4EP06730 217 aaKnown RBP8.15□□□□□ -1.1
CCDC60-202ENST00000535685 MYOD1P15172 320 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 PTBP1P26599 531 aaKnown RBP eCLIP8.15□□□□□ -1.1
CCDC60-202ENST00000535685 ARL3P36405 182 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 UCP3P55916 312 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 ERVK-16P61578 105 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 CD300EQ496F6 205 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-202ENST00000535685 FAM106AQ4KMX7 169 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 ZNF585BQ52M93 769 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 LPCAT3Q6P1A2 487 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 C19orf35Q6ZS72 473 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 CLRN3Q8NCR9 226 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 OR1L8Q8NGR8 309 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 ZNF502Q8TBZ5 544 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 VN1R17PQ8TDU5 208 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 DGCR14Q96DF8 476 aaKnown RBP8.15□□□□□ -1.1
CCDC60-202ENST00000535685 THYN1Q9P016 225 aa8.15□□□□□ -1.1
CCDC60-202ENST00000535685 CYB5BO43169 146 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 PMP2P02689 132 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 FCER2P06734 321 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 TRAPPC2P0DI81 140 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 TRAPPC2BP0DI82 140 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 C8orf88P0DMB2 117 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 DEFA4P12838 97 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 FOLR2P14207 255 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 CBLN1P23435 193 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 RCVRNP35243 200 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 HRH1P35367 487 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 RORCP51449 518 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 ELLP55199 621 aaPredicted RBP8.14□□□□□ -1.11
CCDC60-202ENST00000535685 NCS1P62166 190 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 HAGHQ16775 308 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 CLEC19AQ6UXS0 136 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 GDPD1Q8N9F7 314 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 DMBX1Q8NFW5 382 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 FCAMRQ8WWV6 532 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 MARC2Q969Z3 335 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 SPATA25Q9BR10 227 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 FXYD6Q9H0Q3 95 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 NDUFA4L2Q9NRX3 87 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 FKBP11Q9NYL4 201 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 COMMD3Q9UBI1 195 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 TENM2Q9NT68 2774 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 RYR3Q15413 4870 aa8.14□□□□□ -1.11
CCDC60-202ENST00000535685 TRAV25A0A0B4J276 109 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 TEX50A0A1B0GTY4 177 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 TMEM213A2RRL7 107 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 MFSD2BA6NFX1 497 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 GABARAPO95166 117 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 HLA-AP01891 365 aaKnown RBP8.13□□□□□ -1.11
CCDC60-202ENST00000535685 RLN1P04808 185 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 CLEC3BP05452 202 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 SERPINE2P07093 398 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 ELK1P19419 428 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 S100GP29377 79 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 LPAR6P43657 344 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 VBP1P61758 197 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 CTF1Q16619 201 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 CASC10Q5T4H9 136 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 OR1L6Q8NGR2 347 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 OR5B3Q8NH48 314 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 DYNLRB2Q8TF09 96 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 TSC22D3Q99576 134 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 ZNF436Q9C0F3 470 aaPredicted RBP8.13□□□□□ -1.11
CCDC60-202ENST00000535685 TUBA4BQ9H853 241 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 EDA2RQ9HAV5 297 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 SLC2A8Q9NY64 477 aa8.13□□□□□ -1.11
CCDC60-202ENST00000535685 SNAPC5O75971 98 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 REG1AP05451 166 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 HLA-DMAP28067 261 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 TSPAN5P62079 268 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 WT1-ASQ06250 92 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 MZT2AQ6P582 158 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 SLC38A6Q8IZM9 456 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 OR10W1Q8NGF6 305 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 AP3S1Q92572 193 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 LSM10Q969L4 123 aaKnown RBP8.12□□□□□ -1.11
CCDC60-202ENST00000535685 NEURL2Q9BR09 285 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 PALMDQ9NP74 551 aa8.12□□□□□ -1.11
CCDC60-202ENST00000535685 TMEM14BQ9NUH8 114 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms