RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 FAM212BQ9NTI7 297 aaPredicted RBP8.31□□□□□ -1.08
CLSTN3-206ENST00000535668 COMMD9Q9P000 198 aa8.31□□□□□ -1.08
CLSTN3-206ENST00000535668 VPS13DQ5THJ4 4388 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 A0A075B6Q4 140 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 TMEM235A6NFC5 223 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 C15orf62A8K5M9 175 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 CYB5BO43169 146 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 TGOLN2O43493 480 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 PPYP01298 95 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 SERPINE2P07093 398 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 TCTAP57738 103 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 ARPC4P59998 168 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 ODF3L2Q3SX64 289 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 DHRS11Q6UWP2 260 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 BTNL8Q6UX41 500 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 RBPMS2Q6ZRY4 209 aaKnown RBP8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 C19orf35Q6ZS72 473 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 LYG2Q86SG7 212 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 NUDCD2Q8WVJ2 157 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 S100ZQ8WXG8 99 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 PPP1R14BQ96C90 147 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 ZNF414Q96IQ9 312 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 QTRT1Q9BXR0 403 aaKnown RBP8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 NDUFA4L2Q9NRX3 87 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 TXNL4BQ9NX01 149 aaKnown RBP8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 TAS2R8Q9NYW2 309 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 KLK5Q9Y337 293 aaPredicted RBP8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 ETV7Q9Y603 341 aa8.3□□□□□ -1.08
CLSTN3-206ENST00000535668 ZNF320A2RRD8 509 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 H3BMQ9 156 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 GABARAPO95166 117 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 CD5P06127 495 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 DEFA4P12838 97 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 ADMP35318 185 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 CMC4P56277 68 aaPredicted RBP8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 GNG2P59768 71 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 EWSR1Q01844 656 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 CATR1Q13166 79 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 LAMTOR1Q6IAA8 161 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 C22orf42Q6IC83 251 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 SFXN4Q6P4A7 337 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 PLET1Q6UQ28 207 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 SPAG16Q8N0X2 631 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 BEST4Q8NFU0 473 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 GATAD1Q8WUU5 269 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 GALNT14Q96FL9 552 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 OR10C1Q96KK4 312 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 COMMD5Q9GZQ3 224 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 MAP6D1Q9H9H5 199 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 RHBDL2Q9NX52 303 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 ANAPC10Q9UM13 185 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 SPATA2Q9UM82 520 aa8.29□□□□□ -1.08
CLSTN3-206ENST00000535668 A0A0J9YWU9 116 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 OR4C46A6NHA9 309 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 SCAF4O95104 1147 aaKnown RBP8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 FCGR2CP31995 323 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 CBX5P45973 191 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 WT1-ASQ06250 92 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 NEDD8Q15843 81 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 ZNF585BQ52M93 769 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 GPR107Q5VW38 600 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 STPG3Q8N7X2 389 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 C11orf68Q9H3H3 251 aaKnown RBP8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 CCL28Q9NRJ3 127 aa8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 F11RQ9Y624 299 aaKnown RBP8.28□□□□□ -1.08
CLSTN3-206ENST00000535668 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 CTSGP08311 255 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 TRAPPC2P0DI81 140 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 TRAPPC2BP0DI82 140 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 NAT1P18440 290 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 GNRHRP30968 328 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 GPR183P32249 361 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 OR2B11Q5JQS5 317 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 FAM90A2PQ658T7 463 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 OR5AP2Q8NGF4 316 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 OR1L8Q8NGR8 309 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 OR5B3Q8NH48 314 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 SLC25A38Q96DW6 304 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 TXN2Q99757 166 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 KRTAP17-1Q9BYP8 105 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 AUNIPQ9H7T9 357 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 TMEM140Q9NV12 185 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 DNAH6Q9C0G6 4158 aa8.27□□□□□ -1.09
CLSTN3-206ENST00000535668 TRAV2A0A0B4J234 112 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 TEX50A0A1B0GTY4 177 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 MARCH11A6NNE9 402 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 K7EIM0 57 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 IGHV3-23P01764 117 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 F2RP25116 425 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 MFAP2P55001 183 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 ZNF818PQ6ZRF7 136 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 ZNF114Q8NC26 417 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 OR1P1Q8NH06 330 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 LGALS14Q8TCE9 139 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 SCARB1Q8WTV0 552 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 LSM10Q969L4 123 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 YIPF6Q96EC8 236 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 FUNDC2Q9BWH2 189 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 WDR12Q9GZL7 423 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms