RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 OR2A4O95047 310 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 HRASP01112 189 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 IL7P13232 177 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 MYOD1P15172 320 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 RPA2P15927 270 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 SURF2Q15527 256 aaPredicted RBP9.56□□□□□ -0.88
USF1-211ENST00000534633 C10orf55Q5SWW7 151 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 ADAD2Q8NCV1 583 aaKnown RBP9.56□□□□□ -0.88
USF1-211ENST00000534633 ZFAND1Q8TCF1 268 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 CD300LFQ8TDQ1 290 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 OR2A7Q96R45 310 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 FAM212BQ9NTI7 297 aaPredicted RBP9.56□□□□□ -0.88
USF1-211ENST00000534633 MCUBQ9NWR8 336 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 RYR2Q92736 4967 aa9.56□□□□□ -0.88
USF1-211ENST00000534633 MSGN1A6NI15 193 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 UPK2O00526 184 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 PLA2G10O15496 165 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 KRASP01116 189 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 NQO2P16083 231 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 G6PCP35575 357 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 SYNJ2BPP57105 145 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 AP3S2P59780 193 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 HAGHQ16775 308 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 SP6Q3SY56 376 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 LCN12Q6JVE5 192 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 ZNF343Q6P1L6 599 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 IL34Q6ZMJ4 242 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 GTSCR1Q86UQ5 136 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 DEDD2Q8WXF8 326 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 SEC22AQ96IW7 307 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 BET1LQ9NYM9 111 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 SIGLEC8Q9NYZ4 499 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 COMMD9Q9P000 198 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 PEF1Q9UBV8 284 aaKnown RBP9.55□□□□□ -0.88
USF1-211ENST00000534633 SCP2D1Q9UJQ7 156 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 STARD9Q9P2P6 4700 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 SACSQ9NZJ4 4579 aa9.55□□□□□ -0.88
USF1-211ENST00000534633 C3orf85A0A1B0GTC6 90 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 LINC00854A0A1B0GVQ3 168 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 MARCH11A6NNE9 402 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 BTCP35070 178 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 CCR6P51684 374 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 SUPT4H1P63272 117 aaKnown RBP9.54□□□□□ -0.88
USF1-211ENST00000534633 TNXAQ16473 311 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 TATDN3Q17R31 274 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 ZNF57Q68EA5 555 aaPredicted RBP9.54□□□□□ -0.88
USF1-211ENST00000534633 MMD2Q8IY49 270 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 CADM3Q8N126 398 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 VSTM2AQ8TAG5 236 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 GLYATL2Q8WU03 294 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 SRSF12Q8WXF0 261 aaKnown RBP9.54□□□□□ -0.88
USF1-211ENST00000534633 USMG5Q96IX5 58 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 TMEM140Q9NV12 185 aa9.54□□□□□ -0.88
USF1-211ENST00000534633 CRYM-AS1A6NIL9 109 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 DBX1A6NMT0 343 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 TEX22C9J3V5 150 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 RBMXL2O75526 392 aaKnown RBP9.53□□□□□ -0.88
USF1-211ENST00000534633 IGKV1-5P01602 117 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 OR9G9P0C7N8 305 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 P0C879 139 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 APELAP0DMC3 54 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 UCP1P25874 307 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 RPL8P62917 257 aaKnown RBP9.53□□□□□ -0.88
USF1-211ENST00000534633 RPEL1Q2QD12 228 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 TRIQKQ629K1 86 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 OR4A5Q8NH83 315 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 LHFPL5Q8TAF8 219 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 NAA60Q9H7X0 242 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 TUBA4BQ9H853 241 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 COA4Q9NYJ1 87 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 COPZ2Q9P299 210 aa9.53□□□□□ -0.88
USF1-211ENST00000534633 A0A0G2JRQ6 117 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 TEX13DA0A0J9YY54 714 aaPredicted RBP9.52□□□□□ -0.89
USF1-211ENST00000534633 HMX3A6NHT5 357 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 CDS2O95674 445 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 TRBV12-3P01733 135 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 CSN3P07498 182 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 OR5AC1P0C628 307 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 HLA-GP17693 338 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 S100GP29377 79 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 FAUP35544 74 aaKnown RBP9.52□□□□□ -0.89
USF1-211ENST00000534633 IFITM3Q01628 133 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 IZUMO4Q1ZYL8 232 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 ADAMTSL5Q6ZMM2 481 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 DMBX1Q8NFW5 382 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 OR2K2Q8NGT1 345 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 AIFM2Q9BRQ8 373 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 TMEM222Q9H0R3 208 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 PEMTQ9UBM1 199 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 C14orf166Q9Y224 244 aaKnown RBP9.52□□□□□ -0.89
USF1-211ENST00000534633 NSG2Q9Y328 171 aa9.52□□□□□ -0.89
USF1-211ENST00000534633 DNAH1Q9P2D7 4330 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 TEX50A0A1B0GTY4 177 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 SERPINE2P07093 398 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 MAS1LP35410 378 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 MECP2P51608 486 aaKnown RBP9.51□□□□□ -0.89
USF1-211ENST00000534633 OR2B8PP59922 312 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 DEFA5Q01523 94 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 DHODHQ02127 395 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 Q6ZRM9 215 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms