RNA–Protein interactions for RNA: ENST00000534581.1

C11orf49-222, Transcript of chromosome 11 open reading frame 49, human

TSL 3

Gene C11orf49, Length 542 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf49-222	ENST00000534581	PPIF	P30405	207 aa	Known RBP	13.36	□□□□□ -0.27
C11orf49-222	ENST00000534581	THOC7	Q6I9Y2	204 aa	Known RBP	13.36	□□□□□ -0.27
C11orf49-222	ENST00000534581	LCNL1	Q6ZST4	164 aa		13.36	□□□□□ -0.27
C11orf49-222	ENST00000534581	LRTM2	Q8N967	370 aa		13.36	□□□□□ -0.27
C11orf49-222	ENST00000534581	WIPF2	Q8TF74	440 aa	Predicted RBP	13.36	□□□□□ -0.27
C11orf49-222	ENST00000534581	MS4A10	Q96PG2	267 aa		13.36	□□□□□ -0.27
C11orf49-222	ENST00000534581	CITED1	Q99966	193 aa		13.36	□□□□□ -0.27
C11orf49-222	ENST00000534581	ST8SIA3	O43173	380 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	PTTG1	O95997	202 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	DHFR	P00374	187 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	IFNA21	P01568	189 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	REG1A	P05451	166 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	SULT1A3	P0DMM9	295 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	SULT1A4	P0DMN0	295 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	HSPE1	P61604	102 aa	Known RBP	13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	NSUN5P1	Q3KNT7	163 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	SPINK9	Q5DT21	86 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	ASPHD1	Q5U4P2	390 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581		Q6ZRM9	215 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	MRPL41	Q8IXM3	137 aa	Known RBP	13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	ZNF431	Q8TF32	576 aa	Predicted RBP	13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	GPN1	Q9HCN4	374 aa	Predicted RBP	13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	ENY2	Q9NPA8	101 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	NDUFA4L2	Q9NRX3	87 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	TMED3	Q9Y3Q3	217 aa		13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.35	□□□□□ -0.27
C11orf49-222	ENST00000534581		A0A1B0GW64	132 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	NXPH3	O95157	252 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	RPLP1	P05386	114 aa	Known RBP	13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	OR13C7	P0DN81	318 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	DEFA4	P12838	97 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	AREG	P15514	252 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	SPN	P16150	400 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	SMCO1	Q147U7	214 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	RGS21	Q2M5E4	152 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	C19orf54	Q5BKX5	351 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	TCTEX1D4	Q5JR98	221 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	ZNF429	Q86V71	674 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	TTC9C	Q8N5M4	171 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	OR10W1	Q8NGF6	305 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	OR1S1	Q8NH92	325 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	MITD1	Q8WV92	249 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	SRSF8	Q9BRL6	282 aa	Known RBP	13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	KLK15	Q9H2R5	256 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	PLEKHA3	Q9HB20	300 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	ZNF257	Q9Y2Q1	563 aa		13.34	□□□□□ -0.27
C11orf49-222	ENST00000534581	COL6A5	A8TX70	2615 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581		A0A1B0GU03	582 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	CGB1	A6NKQ9	187 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	NUDT19	A8MXV4	375 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	SOX15	O60248	233 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	ADAP1	O75689	374 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	IGLV1-40	P01703	118 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	TRGV3	P03979	118 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	IL5	P05113	134 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	PSMB8	P28062	276 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	PSMB6	P28072	239 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	HOXA1	P49639	335 aa	Predicted RBP	13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	RAB9A	P51151	201 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	TPPP2	P59282	170 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	CD83	Q01151	205 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	NMS	Q5H8A3	153 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	GGNBP1	Q5YKI7	109 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	MARVELD1	Q9BSK0	173 aa		13.33	□□□□□ -0.28
C11orf49-222	ENST00000534581	NPIPB5	A8MRT5	1133 aa		13.32	□□□□□ -0.28
C11orf49-222	ENST00000534581	CEBPZOS	A8MTT3	80 aa		13.32	□□□□□ -0.28
C11orf49-222	ENST00000534581	PRAF2	O60831	178 aa		13.32	□□□□□ -0.28
C11orf49-222	ENST00000534581	PRH1	P02810	166 aa		13.32	□□□□□ -0.28
C11orf49-222	ENST00000534581	PRCD	Q00LT1	54 aa		13.32	□□□□□ -0.28
C11orf49-222	ENST00000534581	NDUFA11	Q86Y39	141 aa		13.32	□□□□□ -0.28
C11orf49-222	ENST00000534581	SLA2	Q9H6Q3	261 aa		13.32	□□□□□ -0.28
C11orf49-222	ENST00000534581	ZFP57	Q9NU63	452 aa		13.32	□□□□□ -0.28
C11orf49-222	ENST00000534581	CACFD1	Q9UGQ2	172 aa		13.32	□□□□□ -0.28
C11orf49-222	ENST00000534581	IGLC7	A0M8Q6	106 aa		13.31	□□□□□ -0.28
C11orf49-222	ENST00000534581	FAM25E	A8MYX2	175 aa		13.31	□□□□□ -0.28
C11orf49-222	ENST00000534581		H3BUA1	57 aa		13.31	□□□□□ -0.28
C11orf49-222	ENST00000534581	SPCS3	P61009	180 aa		13.31	□□□□□ -0.28
C11orf49-222	ENST00000534581	RPL23A	P62750	156 aa	Known RBP	13.31	□□□□□ -0.28
C11orf49-222	ENST00000534581	ERH	P84090	104 aa	Known RBP	13.31	□□□□□ -0.28
C11orf49-222	ENST00000534581	C19orf35	Q6ZS72	473 aa		13.31	□□□□□ -0.28
C11orf49-222	ENST00000534581	C13orf42	A0A1B0GVH6	325 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581		M0QZ24	198 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	CYB5B	O43169	146 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	CTRB1	P17538	263 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	WT1-AS	Q06250	92 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	C2orf68	Q2NKX9	166 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	CTRB2	Q6GPI1	263 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	RNF152	Q8N8N0	203 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	KLHL30-AS1	Q8NEE0	82 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	OR52E5	Q8NH55	327 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	ANK2	Q01484	3957 aa		13.3	□□□□□ -0.28
C11orf49-222	ENST00000534581	OR2J3	O76001	311 aa		13.29	□□□□□ -0.28
C11orf49-222	ENST00000534581	CRYGC	P07315	174 aa		13.29	□□□□□ -0.28
C11orf49-222	ENST00000534581	SLC25A6	P12236	298 aa		13.29	□□□□□ -0.28
C11orf49-222	ENST00000534581	SNCA	P37840	140 aa		13.29	□□□□□ -0.28
C11orf49-222	ENST00000534581	RHOG	P84095	191 aa		13.29	□□□□□ -0.28
C11orf49-222	ENST00000534581	DEFA5	Q01523	94 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms