RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910	RAMP3	O60896	148 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	LY6H	O94772	140 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	SNAPIN	O95295	136 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	CLDN1	O95832	211 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	SAA2	P0DJI9	122 aa	Predicted RBP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	MMP9	P14780	707 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	CCL3L1	P16619	93 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	CNN1	P51911	297 aa	Known RBP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	EFNA4	P52798	201 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	TMEM33	P57088	247 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	S100A10	P60903	97 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	RAB4B	P61018	213 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	SMCO1	Q147U7	214 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	AVPI1	Q5T686	147 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	FAM71F2	Q6NXP2	309 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	TEX261	Q6UWH6	196 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	BTNL3	Q6UXE8	466 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF833P	Q6ZTB9	187 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	HAPLN4	Q86UW8	402 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	FAM219A	Q8IW50	185 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	SPAG16	Q8N0X2	631 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	C11orf42	Q8N5U0	333 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	OR8B3	Q8NGG8	313 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	STOML3	Q8TAV4	291 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	TCTEX1D2	Q8WW35	142 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	H1FX	Q92522	213 aa	Known RBP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	LEAP2	Q969E1	77 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	ST6GALNAC6	Q969X2	333 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	GPR146	Q96CH1	333 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	RAB39B	Q96DA2	213 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	ADTRP	Q96IZ2	230 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF48	Q96MX3	618 aa	Predicted RBP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	OR8B2	Q96RD0	313 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	GEMIN7	Q9H840	131 aa	Known RBP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	HIF1AN	Q9NWT6	349 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	GSKIP	Q9P0R6	139 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	MIOX	Q9UGB7	285 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	RALY	Q9UKM9	306 aa	Known RBP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	LSM4	Q9Y4Z0	139 aa	Known RBP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	MMP24	Q9Y5R2	645 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910		U3KQ87	197 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	MALRD1	Q5VYJ5	2156 aa		4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	SPTAN1	Q13813	2472 aa	Known RBP	4.62	□□□□□ -1.67
CHKA-208	ENST00000533910	COL12A1	Q99715	3063 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	KANTR	A0A1W2PQU2	76 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	FAM90A26	D6RGX4	464 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910		E5RGE8	158 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910		M0R1X1	148 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	PPIH	O43447	177 aa	Known RBP	4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	ATG12	O94817	140 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	S1PR2	O95136	353 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	IFNA7	P01567	189 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	IGHV1-8	P0DP01	117 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	M6PR	P20645	277 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	NFYB	P25208	207 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	KIR2DS2	P43631	304 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	LPAR6	P43657	344 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	NKX2-1	P43699	371 aa	Predicted RBP	4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	THBS3	P49746	956 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF137P	P52743	207 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	AKR1C2	P52895	323 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	UBA52	P62987	128 aa	Known RBP	4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	EXOSC2	Q13868	293 aa	Known RBP	4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	NDUFA5	Q16718	116 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	VWC2	Q2TAL6	325 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	MIDN	Q504T8	468 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	RPL39P5	Q59GN2	51 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	WDR25	Q64LD2	544 aa	Predicted RBP	4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	LY6G5B	Q8NDX9	201 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	DMBX1	Q8NFW5	382 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	PATZ1	Q9HBE1	687 aa	Known RBP	4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	ONECUT1	Q9UBC0	465 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	CACNG5	Q9UF02	275 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	NAGK	Q9UJ70	344 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	NSG2	Q9Y328	171 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	FAM96B	Q9Y3D0	163 aa		4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	LSM5	Q9Y4Y9	91 aa	Known RBP	4.61	□□□□□ -1.67
CHKA-208	ENST00000533910	ABCA2	Q9BZC7	2435 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910		A0A1W2PPE3	182 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910		A8MXK9	166 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	GPR137B	O60478	399 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	FCGR3B	O75015	233 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	NDUFS7	O75251	213 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	TMEM50A	O95807	157 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	HPRT1	P00492	218 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	CFD	P00746	253 aa	Predicted RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	IGHV3-7	P01780	117 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	IGHV4-39	P01824	125 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	RLN2	P04090	185 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	GAPDH	P04406	335 aa	Known RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	NQO2	P16083	231 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	RPL12	P30050	165 aa	Known RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	FCGR2B	P31994	310 aa	Predicted RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	GPR6	P46095	362 aa	Predicted RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	IER3	P46695	156 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	P2RY1	P47900	373 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	GNG10	P50151	68 aa		4.6	□□□□□ -1.67

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