RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 UQCC1Q9NVA1 299 aa5.69□□□□□ -1.5
SOX6-215ENST00000533411 TMEM160Q9NX00 188 aa5.69□□□□□ -1.5
SOX6-215ENST00000533411 FKBP11Q9NYL4 201 aa5.69□□□□□ -1.5
SOX6-215ENST00000533411 CDC42EP3Q9UKI2 254 aa5.69□□□□□ -1.5
SOX6-215ENST00000533411 TCF19Q9Y242 345 aa5.69□□□□□ -1.5
SOX6-215ENST00000533411 FBN1P35555 2871 aaKnown RBP5.69□□□□□ -1.5
SOX6-215ENST00000533411 LOC105371242A0A075B767 164 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 KRBOX1C9JBD0 128 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 FAM157AC9JC47 383 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 KBTBD11O94819 623 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 IFNA10P01566 189 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 FAM157CP0CG43 387 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 SAA1P0DJI8 122 aaPredicted RBP5.68□□□□□ -1.5
SOX6-215ENST00000533411 SRD5A1P18405 259 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 MC5RP33032 325 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 RAB2AP61019 212 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 LMO4P61968 165 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 RAB11AP62491 216 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 VMA21Q3ZAQ7 101 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 TMEM177Q53S58 311 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 SPINK9Q5DT21 86 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 DPPA3Q6W0C5 159 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 C1orf229Q6ZS94 237 aaPredicted RBP5.68□□□□□ -1.5
SOX6-215ENST00000533411 CCDC28AQ8IWP9 274 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 MRPL41Q8IXM3 137 aaKnown RBP5.68□□□□□ -1.5
SOX6-215ENST00000533411 COMMD1Q8N668 190 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 LINC01356Q8N9X3 169 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 LY6G5BQ8NDX9 201 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 LFNGQ8NES3 379 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 OR10P1Q8NGE3 313 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 OR5B3Q8NH48 314 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 FAM213BQ8TBF2 198 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 MARC2Q969Z3 335 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 RPEQ96AT9 228 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 FLYWCH2Q96CP2 140 aaKnown RBP5.68□□□□□ -1.5
SOX6-215ENST00000533411 PSMG3Q9BT73 122 aaPredicted RBP5.68□□□□□ -1.5
SOX6-215ENST00000533411 PLEKHA3Q9HB20 300 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 HEYLQ9NQ87 328 aaPredicted RBP5.68□□□□□ -1.5
SOX6-215ENST00000533411 TMEM14BQ9NUH8 114 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 BET1LQ9NYM9 111 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 ZNF257Q9Y2Q1 563 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 OR51B2Q9Y5P1 312 aa5.68□□□□□ -1.5
SOX6-215ENST00000533411 ARHGAP32A7KAX9 2087 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 C15orf62A8K5M9 175 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 A8MXK9 166 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 UPK2O00526 184 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 TSPAN15O95858 294 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 IGLV1-47P01700 117 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 IGHV2-5P01817 119 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 IGKV1-16P04430 117 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 FGF7P21781 194 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 NPY1RP25929 384 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 CEACAM3P40198 252 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 HSPE1P61604 102 aaKnown RBP5.67□□□□□ -1.5
SOX6-215ENST00000533411 RPS16P62249 146 aaKnown RBP5.67□□□□□ -1.5
SOX6-215ENST00000533411 PRCDQ00LT1 54 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 RUNX1Q01196 453 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 PJVKQ0ZLH3 352 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 TM4SF20Q53R12 229 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 C4orf48Q5BLP8 95 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 HAPLN4Q86UW8 402 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 THNSL2Q86YJ6 484 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 PUSL1Q8N0Z8 303 aaKnown RBP5.67□□□□□ -1.5
SOX6-215ENST00000533411 LINC00528Q8N1L1 170 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 PNKDQ8N490 385 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 SLC24A4Q8NFF2 622 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 LHX4Q969G2 390 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 ST6GALNAC6Q969X2 333 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 C1orf159Q96HA4 380 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 HINT2Q9BX68 163 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 WDR61Q9GZS3 305 aaKnown RBP5.67□□□□□ -1.5
SOX6-215ENST00000533411 MS4A7Q9GZW8 240 aaPredicted RBP5.67□□□□□ -1.5
SOX6-215ENST00000533411 HRH4Q9H3N8 390 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 KCNIP2Q9NS61 270 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 TIMM9Q9Y5J7 89 aa5.67□□□□□ -1.5
SOX6-215ENST00000533411 TRAV3A0A0B4J244 114 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 IGHV2-70DA0A0C4DH43 119 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 A0A1W2PN81 502 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 BTBD17A6NE02 478 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 B4DSR2 109 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 C17orf112F2Z3M2 114 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 BUB1B-PAK6H3BSN5 160 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 FOXH1O75593 365 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 HBE1P02100 147 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 IFNA4P05014 189 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 HNF1AP20823 631 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 HTR1DP28221 377 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 CHRNA7P36544 502 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 VDAC2P45880 294 aaPredicted RBP5.66□□□□□ -1.5
SOX6-215ENST00000533411 LGALS7P47929 136 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 DVL1P1P54792 670 aaPredicted RBP5.66□□□□□ -1.5
SOX6-215ENST00000533411 ATP5IP56385 69 aaPredicted RBP5.66□□□□□ -1.5
SOX6-215ENST00000533411 RPL8P62917 257 aaKnown RBP5.66□□□□□ -1.5
SOX6-215ENST00000533411 DLK1P80370 383 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 ARL16Q0P5N6 197 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 LRRC75BQ2VPJ9 315 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 TMEM95Q3KNT9 176 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 ETV3LQ6ZN32 361 aa5.66□□□□□ -1.5
SOX6-215ENST00000533411 MOB3BQ86TA1 216 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms