RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 IGKV1D-13A0A0B4J2D9 117 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 C15orf62A8K5M9 175 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 IGLL5B9A064 214 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 K7EMT4 169 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 CASQ2O14958 399 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-216ENST00000533078 TNFSF12O43508 249 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 HPRT1P00492 218 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 IGLV2-14P01704 120 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 IGKV1-13P0DP09 117 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 RAB3BP20337 219 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 ERVK-16P61578 105 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 RELQ04864 619 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-216ENST00000533078 MSMO1Q15800 293 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 Q56UQ5 140 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 APRG1Q8IVJ8 170 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 ZBTB34Q8NCN2 500 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 C21orf62Q9NYP8 219 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 ANXA10Q9UJ72 324 aa8.51□□□□□ -1.05
CMTM1-216ENST00000533078 IGLC7A0M8Q6 106 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 NUPL2O15504 423 aaKnown RBP8.5□□□□□ -1.05
CMTM1-216ENST00000533078 RBFOX2O43251 390 aaKnown RBP eCLIP8.5□□□□□ -1.05
CMTM1-216ENST00000533078 XRCC3O43542 346 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 ZNF207O43670 478 aaKnown RBP8.5□□□□□ -1.05
CMTM1-216ENST00000533078 YIF1AO95070 293 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 CA1P00915 261 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-216ENST00000533078 CD5P06127 495 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 EIF4EP06730 217 aaKnown RBP8.5□□□□□ -1.05
CMTM1-216ENST00000533078 FGF2P09038 288 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 TRAPPC2P0DI81 140 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 TRAPPC2BP0DI82 140 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 OR13C7P0DN81 318 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 TFPI2P48307 235 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 MFAP2P55001 183 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 OR10A3P58181 314 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 TMEM187Q14656 261 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 BORCS5Q969J3 196 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 MGLLQ99685 303 aa8.5□□□□□ -1.05
CMTM1-216ENST00000533078 IGKV3-7A0A075B6H7 116 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 TMEM235A6NFC5 223 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 SULT1C2O00338 296 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 UPK2O00526 184 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 S1PR2O95136 353 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 SERPINE2P07093 398 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 EIF4EBP1Q13541 118 aaPredicted RBP8.49□□□□□ -1.05
CMTM1-216ENST00000533078 OGFRL1Q5TC84 451 aaPredicted RBP8.49□□□□□ -1.05
CMTM1-216ENST00000533078 TMEM116Q8NCL8 245 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 OR1L8Q8NGR8 309 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 OR13F1Q8NGS4 319 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 NUDCD2Q8WVJ2 157 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 HINT2Q9BX68 163 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 TMEM140Q9NV12 185 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 ELF5Q9UKW6 265 aaPredicted RBP8.49□□□□□ -1.05
CMTM1-216ENST00000533078 DNAH17Q9UFH2 4485 aa8.49□□□□□ -1.05
CMTM1-216ENST00000533078 IGHV3OR16-8A0A075B7F1 116 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 IGHV7-4-1A0A0J9YVY3 117 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 DNASE2O00115 360 aaPredicted RBP8.48□□□□□ -1.05
CMTM1-216ENST00000533078 MED14OSP0DP75 135 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 FCGR2CP31995 323 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 PRR20EP86478 221 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 PRR20CP86479 221 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 PRR20DP86480 221 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 PRR20BP86481 221 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 PRR20AP86496 221 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 AADACL3Q5VUY0 350 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 GVQW1Q8N7I0 195 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 LSM10Q969L4 123 aaKnown RBP8.48□□□□□ -1.05
CMTM1-216ENST00000533078 GPHA2Q96T91 129 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 RNF2Q99496 336 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 GINS3Q9BRX5 216 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 RHPN1-AS1Q9BWJ2 59 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 SLC5A7Q9GZV3 580 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 HRH4Q9H3N8 390 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 PLEKHA2Q9HB19 425 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 CCL28Q9NRJ3 127 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 COMMD9Q9P000 198 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 SMPXQ9UHP9 88 aa8.48□□□□□ -1.05
CMTM1-216ENST00000533078 F11RQ9Y624 299 aaKnown RBP8.48□□□□□ -1.05
CMTM1-216ENST00000533078 IGHV3-21A0A0B4J1V1 117 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 DEFB4AO15263 64 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 SNAPC5O75971 98 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 BRWD1-AS2P59051 145 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 FXYD4P59646 89 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 TMEM41BQ5BJD5 291 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 ZNF367Q7RTV3 350 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 PRSS48Q7RTY5 328 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 STHQ8IWL8 128 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 BEST4Q8NFU0 473 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 TSPAN14Q8NG11 270 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 OR10W1Q8NGF6 305 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 OR51H1Q8NH63 302 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 SCARB1Q8WTV0 552 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 TMEM56Q96MV1 263 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 CHRDL1Q9BU40 450 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 DUSP21Q9H596 190 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 ETV7Q9Y603 341 aa8.47□□□□□ -1.05
CMTM1-216ENST00000533078 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
CMTM1-216ENST00000533078 TRAV14DV4A0A0A6YYC5 116 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 TRAV3A0A0B4J244 114 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms