RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OR2K2Q8NGT1 345 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 OR52I2Q8NH67 350 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 CCDC140Q96MF4 163 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 ABHD1Q96SE0 405 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 TSC22D3Q99576 134 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 MTFP1Q9UDX5 166 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 PRNDQ9UKY0 176 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 NSG2Q9Y328 171 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 OR51B2Q9Y5P1 312 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 ZNF320A2RRD8 509 aa13.08□□□□□ -0.32
PHRF1-204ENST00000532550 LGALS9O00182 355 aa13.08□□□□□ -0.32
PHRF1-204ENST00000532550 SERPINE2P07093 398 aa13.08□□□□□ -0.32
PHRF1-204ENST00000532550 IGHV4-30-4P0DP06 118 aa13.08□□□□□ -0.32
PHRF1-204ENST00000532550 SLC25A24Q6NUK1 477 aa13.08□□□□□ -0.32
PHRF1-204ENST00000532550 DYNLRB2Q8TF09 96 aa13.08□□□□□ -0.32
PHRF1-204ENST00000532550 ZMAT4Q9H898 229 aa13.08□□□□□ -0.32
PHRF1-204ENST00000532550 NDUFA4L2Q9NRX3 87 aa13.08□□□□□ -0.32
PHRF1-204ENST00000532550 IZUMO1RA6ND01 250 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 MFSD2BA6NFX1 497 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 CD3DP04234 171 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 PGAM2P15259 253 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 PTBP1P26599 531 aaKnown RBP eCLIP13.07□□□□□ -0.32
PHRF1-204ENST00000532550 WT1-ASQ06250 92 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 SPCS2Q15005 226 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 H2BFWTQ7Z2G1 175 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 ARRDC1Q8N5I2 433 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 GDPD1Q8N9F7 314 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 LSM10Q969L4 123 aaKnown RBP13.07□□□□□ -0.32
PHRF1-204ENST00000532550 TMEM56Q96MV1 263 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 TENM3Q9P273 2699 aa13.07□□□□□ -0.32
PHRF1-204ENST00000532550 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 A8MZ25 164 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 CTDSP2O14595 271 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 FOLR2P14207 255 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 TBPP20226 339 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 DEFB114Q30KQ6 69 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 CD300EQ496F6 205 aaPredicted RBP13.06□□□□□ -0.32
PHRF1-204ENST00000532550 ADAMTSL5Q6ZMM2 481 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 TMEM229BQ8NBD8 167 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 OR5B3Q8NH48 314 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 OR4A16Q8NH70 328 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 VN1R17PQ8TDU5 208 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 RAB2BQ8WUD1 216 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 ZNF486Q96H40 463 aaPredicted RBP13.06□□□□□ -0.32
PHRF1-204ENST00000532550 MIXL1Q9H2W2 232 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 TUBA4BQ9H853 241 aa13.06□□□□□ -0.32
PHRF1-204ENST00000532550 TECRQ9NZ01 308 aaKnown RBP13.06□□□□□ -0.32
PHRF1-204ENST00000532550 CBLN1P23435 193 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 TMBIM6P55061 237 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 TAS2R19P59542 299 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 PLET1Q6UQ28 207 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 OR1L6Q8NGR2 347 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 ZNF502Q8TBZ5 544 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 SEC22AQ96IW7 307 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 ZC4H2Q9NQZ6 224 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 TMEM14BQ9NUH8 114 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 C19orf73Q9NVV2 129 aa13.05□□□□□ -0.32
PHRF1-204ENST00000532550 F11RQ9Y624 299 aaKnown RBP13.05□□□□□ -0.32
PHRF1-204ENST00000532550 C15orf61A6NNL5 157 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 GABARAPH6UMI1 98 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 RAB3DO95716 219 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 GPR183P32249 361 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 PIGPP57054 158 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 RND3P61587 244 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 MRPS10P82664 201 aaKnown RBP13.04□□□□□ -0.32
PHRF1-204ENST00000532550 LHFPL1Q86WI0 220 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 LAX1Q8IWV1 398 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 TERB2Q8NHR7 220 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 ZFAND1Q8TCF1 268 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 DIRAS2Q96HU8 199 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 RCHY1Q96PM5 261 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 BCL7BQ9BQE9 202 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 THAP7Q9BT49 309 aaPredicted RBP13.04□□□□□ -0.32
PHRF1-204ENST00000532550 PALMDQ9NP74 551 aa13.04□□□□□ -0.32
PHRF1-204ENST00000532550 ZNF785A8K8V0 405 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 NOL3O60936 208 aaKnown RBP13.03□□□□□ -0.32
PHRF1-204ENST00000532550 IGKV1-39P01597 117 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 CD74P04233 296 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 IGKV1D-39P04432 117 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 PI3P19957 117 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 RPL5P46777 297 aaKnown RBP13.03□□□□□ -0.32
PHRF1-204ENST00000532550 SSBP1Q04837 148 aaKnown RBP13.03□□□□□ -0.32
PHRF1-204ENST00000532550 GUCA2BQ16661 112 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 SCGB2B2Q4G0G5 96 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 STEAP1BQ6NZ63 245 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 MRGPRFQ96AM1 343 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 SLC2A8Q9NY64 477 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 COPZ2Q9P299 210 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 RABL2AQ9UBK7 228 aaPredicted RBP13.03□□□□□ -0.32
PHRF1-204ENST00000532550 RABL2BQ9UNT1 228 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 STAB2Q8WWQ8 2551 aa13.03□□□□□ -0.32
PHRF1-204ENST00000532550 HUWE1Q7Z6Z7 4374 aaKnown RBP13.02□□□□□ -0.32
PHRF1-204ENST00000532550 DBX1A6NMT0 343 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 TGOLN2O43493 480 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 ATG12O94817 140 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 EDN2P20800 178 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 PPP5CP53041 499 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 CD81P60033 236 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 IL18Q14116 193 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 CCDC71LQ8N9Z2 235 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms