RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 BEST4Q8NFU0 473 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR4X2Q8NGF9 303 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 OSR1Q8TAX0 266 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 RBMXL1Q96E39 390 aaKnown RBP4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 RITA1Q96K30 269 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 C20orf24Q9BUV8 137 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR2D2Q9H210 308 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 COMMD3Q9UBI1 195 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 ANXA10Q9UJ72 324 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 WASHC3Q9Y3C0 194 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 TENM1Q9UKZ4 2725 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 TCRBV4S1A1TA0A5B7 111 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 PSMB11A5LHX3 300 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 LINC01548A6NM66 108 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 FAM25AB3EWG3 89 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 FAM25CB3EWG5 89 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 FAM25GB3EWG6 89 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 J3QRK9 145 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 CCSO14618 274 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 HPGDSO60760 199 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 PROP1O75360 226 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 RBBP9O75884 186 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 TSPAN15O95858 294 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 IGHG2P01859 326 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 APOA2P02652 100 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 EIF4EP06730 217 aaKnown RBP4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 FCER2P06734 321 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 PTHLHP12272 177 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 ELK1P19419 428 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 NFYAP23511 347 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 PRSS3P35030 304 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 TMBIM6P55061 237 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 SLC35B1P78383 322 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 PLGLAQ15195 96 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 Q6ZSN1 163 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 NDUFA11Q86Y39 141 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 PDPNQ86YL7 162 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 FAM71E2Q8N5Q1 922 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 GVQW1Q8N7I0 195 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF383Q8NA42 475 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 NPBQ8NG41 125 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 RAB2BQ8WUD1 216 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 NOL4LQ96MY1 436 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 RNF5Q99942 180 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 IFT46Q9NQC8 304 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 NECAP2Q9NVZ3 263 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 SDHAF2Q9NX18 166 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF107Q9UII5 783 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 LINC00527Q9UJ94 153 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 GAB2Q9UQC2 676 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR2W1Q9Y3N9 320 aa4.54□□□□□ -1.68
HMGB1P42-201ENST00000532126 MEIS3P1A6NDR6 274 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 SLC22A5O76082 557 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 HLA-DQB1P01920 261 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 IGKV1-16P04430 117 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR5H8P0DN80 308 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 VDAC1P21796 283 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 CNTFRP26992 372 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 FCGR2CP31995 323 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 THBS3P49746 956 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 LINC00205P59089 165 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 SPCS2Q15005 226 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 CDK10Q15131 360 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 PSG5Q15238 335 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 RTL8BQ17RB0 113 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 C5orf64Q2M2E5 130 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 NSUN5P1Q3KNT7 163 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 TCTEX1D4Q5JR98 221 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 PIK3CD-AS1Q5SR53 167 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 C10orf99Q6UWK7 81 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 H2BFWTQ7Z2G1 175 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF329Q86UD4 541 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 SNX29P2Q8IUI4 249 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 STPG2Q8N412 459 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF645Q8N7E2 425 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR4F17Q8NGA8 305 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR5AP2Q8NGF4 316 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR1L4Q8NGR5 311 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 FLYWCH2Q96CP2 140 aaKnown RBP4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 ADTRPQ96IZ2 230 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR4F4Q96R69 305 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 TSNAXQ99598 290 aaKnown RBP4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 HSPB9Q9BQS6 159 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 FBXL15Q9H469 300 aa4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 TSSC4Q9Y5U2 329 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P42-201ENST00000532126 IGHV7-81A0A0B4J1V7 117 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 IGKV1D-13A0A0B4J2D9 117 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 RGS5O15539 181 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 NDUFA3O95167 84 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 PPYP01298 95 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 HLA-DRB1P01911 266 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 PMP2P02689 132 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 IGF1P05019 195 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 FGF2P09038 288 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 IGKV1-13P0DP09 117 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 AADACP22760 399 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 DUTP33316 252 aaKnown RBP4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 S100A5P33763 92 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 LGALS7P47929 136 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms