RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CD3GP09693 182 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 LIMS3P0CW19 117 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 LIMS4P0CW20 117 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 PTBP1P26599 531 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD44-232ENST00000531118 HTR2CP28335 458 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 SERPINB10P48595 397 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 UNC119Q13432 240 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 ARFRP1Q13795 201 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 FAM90A2PQ658T7 463 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 ZNF66Q6ZN08 573 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 CDH26Q8IXH8 852 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 VKORC1L1Q8N0U8 176 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 PUSL1Q8N0Z8 303 aaKnown RBP5.82□□□□□ -1.48
CD44-232ENST00000531118 CSNK1G2-AS1Q8NCQ2 148 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 TMEM167AQ8TBQ9 72 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 ZNF414Q96IQ9 312 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 UQCC2Q9BRT2 126 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 RHPN1-AS1Q9BWJ2 59 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 OR51E2Q9H255 320 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 SMPD3Q9NY59 655 aaPredicted RBP5.82□□□□□ -1.48
CD44-232ENST00000531118 GHRLQ9UBU3 117 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 TMED3Q9Y3Q3 217 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 A0A1W2PPK0 400 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 IRGMA1A4Y4 181 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 BET1O15155 118 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 UBBP0CG47 229 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 CELP19835 753 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 MAS1LP35410 378 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 XGP55808 180 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 RPS11P62280 158 aaKnown RBP eCLIP5.81□□□□□ -1.48
CD44-232ENST00000531118 GAGE13Q4V321 117 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 OR2B11Q5JQS5 317 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 SPSB3Q6PJ21 355 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 KCTD9Q7L273 389 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 TMEM116Q8NCL8 245 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 OR52I1Q8NGK6 324 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 OR4A4PQ8NGN8 299 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 ZNRF2Q8NHG8 242 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 VSTM2AQ8TAG5 236 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 VN1R17PQ8TDU5 208 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 GIMAP1Q8WWP7 306 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 PGLYRP3Q96LB9 341 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 CMTM3Q96MX0 182 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 VCXQ9H320 206 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 PLEKHJ1Q9NW61 149 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 PKHD1L1Q86WI1 4243 aa5.81□□□□□ -1.48
CD44-232ENST00000531118 IGHV3OR16-13A0A075B7E8 117 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 IGHV3-74A0A0B4J1X5 117 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 IGLC7A0M8Q6 106 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 TRDCB7Z8K6 153 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 NUPL2O15504 423 aaKnown RBP5.8□□□□□ -1.48
CD44-232ENST00000531118 FABP7O15540 132 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 LALBAP00709 142 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 HTN3P15516 51 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 BTF3P20290 206 aaKnown RBP5.8□□□□□ -1.48
CD44-232ENST00000531118 RPS19P39019 145 aaKnown RBP5.8□□□□□ -1.48
CD44-232ENST00000531118 YIF1BQ5BJH7 314 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 IGSF11Q5DX21 431 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 TTC23Q5W5X9 447 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 TMEM88Q6PEY1 159 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 TCF24Q7RTU0 167 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 PACRGLQ8N7B6 248 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 RHOXF1Q8NHV9 184 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 DERL3Q96Q80 235 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 SLC29A1Q99808 456 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 DCUN1D5Q9BTE7 237 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 MS4A6AQ9H2W1 248 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 THYN1Q9P016 225 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 MDFICQ9P1T7 246 aa5.8□□□□□ -1.48
CD44-232ENST00000531118 MRPS7Q9Y2R9 242 aaKnown RBP5.8□□□□□ -1.48
CD44-232ENST00000531118 RBM7Q9Y580 266 aaKnown RBP5.8□□□□□ -1.48
CD44-232ENST00000531118 TRBV6-7A0A0A0MS04 114 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 IGHV3-21A0A0B4J1V1 117 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 TRAV2A0A0B4J234 112 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 KNCNA6PVL3 124 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 FOXI3A8MTJ6 420 aaPredicted RBP5.79□□□□□ -1.48
CD44-232ENST00000531118 TMEM14DPA8MWL7 114 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 SOCS1O15524 211 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 OGG1O15527 345 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 CLEC2LP0C7M8 214 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 SPART-AS1P0CW21 52 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 HLA-GP17693 338 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 GABRB1P18505 474 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 CRHBPP24387 322 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 RPL8P62917 257 aaKnown RBP5.79□□□□□ -1.48
CD44-232ENST00000531118 PAFAH1B2P68402 229 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 PLA2G7Q13093 441 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 TMPRSS11AQ6ZMR5 421 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 Q6ZSN1 163 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 DHRSXQ8N5I4 330 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 ZFP41Q8N8Y5 198 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 C15orf53Q8NAA6 179 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 OR4S2Q8NH73 311 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 OR10J5Q8NHC4 309 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 CYGBQ8WWM9 190 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 ATP6V0BQ99437 205 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 CMSS1Q9BQ75 279 aaKnown RBP5.79□□□□□ -1.48
CD44-232ENST00000531118 ATG101Q9BSB4 218 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 AMBNQ9NP70 447 aa5.79□□□□□ -1.48
CD44-232ENST00000531118 C21orf62Q9NYP8 219 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms