RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TEPPQ6URK8 271 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 MS4A5Q9H3V2 200 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 SLC25A10Q9UBX3 287 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-214ENST00000530886 LOXL2Q9Y4K0 774 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 DMDP11532 3685 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 A0A1B0GXF2 115 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 NPIPA3F8WFD2 350 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 TNFRSF13BO14836 293 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-214ENST00000530886 FGF12P61328 243 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 TIGITQ495A1 244 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 GCSAMLQ5JQS6 135 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 SPATA46Q5T0L3 261 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 IBA57Q5T440 356 aaKnown RBP6.74□□□□□ -1.33
CSDE1-214ENST00000530886 INO80CQ6PI98 192 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-214ENST00000530886 ADAMTSL5Q6ZMM2 481 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 TTC9CQ8N5M4 171 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 TEX45Q8NA69 505 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 LRRC29Q8WV35 223 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 PRDM6Q9NQX0 595 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-214ENST00000530886 ERRFI1Q9UJM3 462 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-214ENST00000530886 ERG28Q9UKR5 140 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 C2orf72A6NCS6 295 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 ZIC3O60481 467 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 SHISA2Q6UWI4 295 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 MOB1BQ7L9L4 216 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 NUDT22Q9BRQ3 303 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 RNASE7Q9H1E1 156 aaKnown RBP6.73□□□□□ -1.33
CSDE1-214ENST00000530886 HSPB8Q9UJY1 196 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 A0A1W2PQU0 124 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 H0Y8X5 98 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 RPL24P83731 157 aaKnown RBP6.73□□□□□ -1.33
CSDE1-214ENST00000530886 DEFB110Q30KQ9 67 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 VGLL1Q99990 258 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 PSG8Q9UQ74 426 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 CT45A6P0DMU7 189 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 CT45A5P0DMU8 189 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 CT45A7P0DMV0 189 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 IGFBP2P18065 325 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 RPL8P62917 257 aaKnown RBP6.73□□□□□ -1.33
CSDE1-214ENST00000530886 C17orf67Q0P5P2 114 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 RSPO4Q2I0M5 234 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-214ENST00000530886 CT45A1Q5HYN5 189 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 ZBTB34Q8NCN2 500 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 CT45A3Q8NHU0 189 aa6.73□□□□□ -1.33
CSDE1-214ENST00000530886 NCKAP5O14513 1909 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 hCG_38984A0A1B0GV85 526 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 C15orf62A8K5M9 175 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 TLX3O43711 291 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-214ENST00000530886 SPINK4O60575 86 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 CLDN14O95500 239 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 KIR2DL2P43627 348 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-214ENST00000530886 PQLC2Q6ZP29 291 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 WDR31Q8NA23 367 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 HRASLS2Q9NWW9 162 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 DEC1Q9P2X7 70 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 RABAC1Q9UI14 185 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 NEURL1O76050 574 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 P04436 131 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 FAM87AP0C7U9 286 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 FOXE3Q13461 319 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 EIF4EBP1Q13541 118 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-214ENST00000530886 WIPI1Q5MNZ9 446 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-214ENST00000530886 SAMD5Q5TGI4 173 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 PARM1Q6UWI2 310 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 OOSP2Q86WS3 158 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 ZNF611Q8N823 705 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 ABHD17AQ96GS6 310 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 GGTLC1Q9BX51 225 aa6.72□□□□□ -1.33
CSDE1-214ENST00000530886 PRSS46E5RG02 174 aa6.71□□□□□ -1.33
CSDE1-214ENST00000530886 SYNGR3O43761 229 aa6.71□□□□□ -1.33
CSDE1-214ENST00000530886 LTBRP36941 435 aa6.71□□□□□ -1.33
CSDE1-214ENST00000530886 PDCD1Q15116 288 aa6.71□□□□□ -1.33
CSDE1-214ENST00000530886 DOLPP1Q86YN1 238 aa6.71□□□□□ -1.33
CSDE1-214ENST00000530886 COL25A1Q9BXS0 654 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-214ENST00000530886 SOX21Q9Y651 276 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-214ENST00000530886 IGLV3-32A0A0A0MS00 114 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 C2CD4DB7Z1M9 353 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 ZG16O60844 167 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 APOA2P02652 100 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 EDDM3BP56851 147 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 SLC35B1P78383 322 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 TREML4Q6UXN2 200 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 Q6ZS92 163 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 LINC00173Q6ZV60 143 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 TSACCQ96A04 125 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-214ENST00000530886 TRIB1Q96RU8 372 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 MGST2Q99735 147 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 SPAG8Q99932 426 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-214ENST00000530886 TMEM167BQ9NRX6 74 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 IDI2-AS1Q9NZ38 188 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 IL36RNQ9UBH0 155 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 LSM4Q9Y4Z0 139 aaKnown RBP6.71□□□□□ -1.34
CSDE1-214ENST00000530886 FRYLO94915 3013 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 A0A1W2PRE2 83 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 hADV38S2A0JD32 116 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 IGHV3-7P01780 117 aa6.71□□□□□ -1.34
CSDE1-214ENST00000530886 TCL1AP56279 114 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms