RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 FAM110DQ8TAY7 271 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-220ENST00000530567 NDUFA4L2Q9NRX3 87 aa16.63■□□□□ 0.25
CAPN1-220ENST00000530567 TCRBV4S1A1TA0A5B7 111 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 KIAA0141Q14154 515 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-220ENST00000530567 C4orf46Q504U0 113 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 CXorf66Q5JRM2 361 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-220ENST00000530567 ZNF429Q86V71 674 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 OR52B4Q8NGK2 314 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 FKBP11Q9NYL4 201 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 ZNF257Q9Y2Q1 563 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 DUS4LO95620 317 aaKnown RBP16.62■□□□□ 0.25
CAPN1-220ENST00000530567 PF4V1P10720 104 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 RAB25P57735 213 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 AARDQ4LEZ3 155 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 C19orf35Q6ZS72 473 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 NDUFA11Q86Y39 141 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 TTC9CQ8N5M4 171 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 OR10W1Q8NGF6 305 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 SRSF8Q9BRL6 282 aaKnown RBP16.62■□□□□ 0.25
CAPN1-220ENST00000530567 PALMDQ9NP74 551 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 CACNG5Q9UF02 275 aa16.62■□□□□ 0.25
CAPN1-220ENST00000530567 TSSC4Q9Y5U2 329 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-220ENST00000530567 DUXBA0A1W2PPF3 345 aa16.61■□□□□ 0.25
CAPN1-220ENST00000530567 ST8SIA3O43173 380 aa16.61■□□□□ 0.25
CAPN1-220ENST00000530567 BRI3O95415 125 aa16.61■□□□□ 0.25
CAPN1-220ENST00000530567 TRAPPC2P0DI81 140 aa16.61■□□□□ 0.25
CAPN1-220ENST00000530567 TRAPPC2BP0DI82 140 aa16.61■□□□□ 0.25
CAPN1-220ENST00000530567 RAB9AP51151 201 aa16.61■□□□□ 0.25
CAPN1-220ENST00000530567 RPL23AP62750 156 aaKnown RBP16.61■□□□□ 0.25
CAPN1-220ENST00000530567 C18orf65Q6ZTR6 163 aa16.61■□□□□ 0.25
CAPN1-220ENST00000530567 NPIPB5A8MRT5 1133 aa16.6■□□□□ 0.25
CAPN1-220ENST00000530567 H3BUA1 57 aa16.6■□□□□ 0.25
CAPN1-220ENST00000530567 CRYGCP07315 174 aa16.6■□□□□ 0.25
CAPN1-220ENST00000530567 SPNP16150 400 aa16.6■□□□□ 0.25
CAPN1-220ENST00000530567 HSPE1P61604 102 aaKnown RBP16.6■□□□□ 0.25
CAPN1-220ENST00000530567 WT1-ASQ06250 92 aa16.6■□□□□ 0.25
CAPN1-220ENST00000530567 KHDC1LQ5JSQ8 128 aa16.6■□□□□ 0.25
CAPN1-220ENST00000530567 THOC7Q6I9Y2 204 aaKnown RBP16.6■□□□□ 0.25
CAPN1-220ENST00000530567 SEC22CQ9BRL7 303 aa16.6■□□□□ 0.25
CAPN1-220ENST00000530567 A0A1W2PRX2 142 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 RBMXL2O75526 392 aaKnown RBP16.59■□□□□ 0.25
CAPN1-220ENST00000530567 REG1AP05451 166 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 CTRB1P17538 263 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 PSMB6P28072 239 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 PRCDQ00LT1 54 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 CTRB2Q6GPI1 263 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 MITD1Q8WV92 249 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 MS4A10Q96PG2 267 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 HINT2Q9BX68 163 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 ZFP57Q9NU63 452 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 COA4Q9NYJ1 87 aa16.59■□□□□ 0.25
CAPN1-220ENST00000530567 TRRAPQ9Y4A5 3859 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 PIGBOS1A0A0B4J2F0 54 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 PRH1P02810 166 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 NSUN5P1Q3KNT7 163 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 TMEM65Q6PI78 240 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 PLET1Q6UQ28 207 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 ZNF491Q8N8L2 437 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 COQ8AQ8NI60 647 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 MARVELD1Q9BSK0 173 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 SLA2Q9H6Q3 261 aa16.58■□□□□ 0.24
CAPN1-220ENST00000530567 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-220ENST00000530567 WNK1Q9H4A3 2382 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 IL5P05113 134 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 SULT1A3P0DMM9 295 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 SULT1A4P0DMN0 295 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 CDX1P47902 265 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-220ENST00000530567 TPPP2P59282 170 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 DEFA5Q01523 94 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 KLK9Q2XQG4 91 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 SPINK9Q5DT21 86 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 ZNF431Q8TF32 576 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-220ENST00000530567 KLK9Q9UKQ9 250 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 TMED3Q9Y3Q3 217 aa16.57■□□□□ 0.24
CAPN1-220ENST00000530567 TRBV9A0A0B4J1U6 114 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 ADAP1O75689 374 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 TRGV3P03979 118 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 HOXB5P09067 269 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 OR13C7P0DN81 318 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 DCTN2Q13561 401 aaKnown RBP16.56■□□□□ 0.24
CAPN1-220ENST00000530567 SMCO1Q147U7 214 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 PDLIM3Q53GG5 364 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-220ENST00000530567 GGNBP1Q5YKI7 109 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 HSD17B13Q7Z5P4 300 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-220ENST00000530567 OR52E5Q8NH55 327 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 UBE2E2Q96LR5 201 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 FANCD2OSQ96PS1 177 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 GNB4Q9HAV0 340 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 ZNF355PQ9NSJ1 428 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 DMRT1Q9Y5R6 373 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 VWFP04275 2813 aa16.56■□□□□ 0.24
CAPN1-220ENST00000530567 A0A1B0GU03 582 aa16.55■□□□□ 0.24
CAPN1-220ENST00000530567 INMT-MINDY4F8WBC2 141 aa16.55■□□□□ 0.24
CAPN1-220ENST00000530567 PITX3O75364 302 aa16.55■□□□□ 0.24
CAPN1-220ENST00000530567 TSPAN15O95858 294 aa16.55■□□□□ 0.24
CAPN1-220ENST00000530567 PTTG1O95997 202 aa16.55■□□□□ 0.24
CAPN1-220ENST00000530567 C2orf68Q2NKX9 166 aa16.55■□□□□ 0.24
CAPN1-220ENST00000530567 KLHL30-AS1Q8NEE0 82 aa16.55■□□□□ 0.24
CAPN1-220ENST00000530567 MPTX1A8MV57 137 aa16.54■□□□□ 0.24
CAPN1-220ENST00000530567 M0QZ24 198 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms