RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 S100A2P29034 98 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 CSNK1A1P48729 337 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 RND2P52198 227 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 S100A10P60903 97 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 PKIAP61925 76 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 DEFA6Q01524 100 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 TGIF1Q15583 401 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 TNXAQ16473 311 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 AKIRIN2Q53H80 203 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 NCMAPQ5T1S8 102 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 Q6ZN92 141 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 OOSP2Q86WS3 158 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 WDFY1Q8IWB7 410 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 ZNF101Q8IZC7 436 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 HIST3H2BBQ8N257 126 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 ZNF565Q8N9K5 539 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 CCDC54Q8NEL0 328 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 OR10G4Q8NGN3 311 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 ZNF721Q8TF20 911 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 RNF138Q8WVD3 245 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 C11orf40Q8WZ69 217 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 FGF14Q92915 247 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 SLAMF6Q96DU3 332 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 ARHGAP5-AS1Q96IT6 56 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 PGLYRP4Q96LB8 373 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 PFDN5Q99471 154 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 RARRES2Q99969 163 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 C2orf88Q9BSF0 95 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 SUCNR1Q9BXA5 334 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 PECRQ9BY49 303 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 ULBP2Q9BZM5 246 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 CHRNA10Q9GZZ6 450 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 KCNJ16Q9NPI9 418 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 GSKIPQ9P0R6 139 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 DOK5Q9P104 306 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 NXT1Q9UKK6 140 aaKnown RBP3.15□□□□□ -1.91
USP47-209ENST00000530041 C14orf166Q9Y224 244 aaKnown RBP3.15□□□□□ -1.91
USP47-209ENST00000530041 GOLT1BQ9Y3E0 138 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 URGCP-MRPS24S4R325 110 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 LRP4O75096 1905 aa3.15□□□□□ -1.91
USP47-209ENST00000530041 SPTBP11277 2137 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 TRAV1-1A0A0B4J248 108 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 IGKV1-9A0A0C4DH69 117 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 RBFOX3A6NFN3 312 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 ZNF726A6NNF4 738 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 LYRM9A8MSI8 78 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 B4DEV8 164 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 ZNF878C9JN71 531 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 SDCBPO00560 298 aaPredicted RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BKO60814 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 PITX3O75364 302 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 YIF1AO95070 293 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 TNFP01375 233 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HSPB1P04792 205 aaKnown RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 HPNP05981 417 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BJP06899 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 CXCL1P09341 107 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 ZNF17P17021 662 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BOP23527 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 DTYMKP23919 212 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BBP33778 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 PPP1CCP36873 323 aaKnown RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 OR3A4PP47883 348 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 NDUFA6P56556 154 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 ZNF121P58317 390 aaPredicted RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BDP58876 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 TAS2R60P59551 318 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 OR2B8PP59922 312 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 UBE2G2P60604 165 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 SPCS3P61009 180 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 RAB4BP61018 213 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 PPP1CAP62136 330 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BCP62807 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 CXCL6P80162 114 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 FMODQ06828 376 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 FOXF1Q12946 379 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 ARFRP1Q13795 201 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 ELOBQ15370 118 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST2H2BEQ16778 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 DEFB110Q30KQ9 67 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 TMEM176BQ3YBM2 270 aaPredicted RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 C9orf129Q5T035 196 aaKnown RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST2H3PS2Q5TEC6 136 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 UFSP1Q6NVU6 142 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 DPPA3Q6W0C5 159 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 SPNS3Q6ZMD2 512 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 SLC35E3Q7Z769 313 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 STX12Q86Y82 276 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 SGPP2Q8IWX5 399 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 TMEM156Q8N614 296 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 SUMF2Q8NBJ7 301 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HSD17B11Q8NBQ5 300 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 APCDD1LQ8NCL9 501 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 OR8B12Q8NGG6 310 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 OR10D4PQ8NGN7 298 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 OR51E1Q8TCB6 317 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 VN1R17PQ8TDU5 208 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms