RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SRP19P09132 144 aaKnown RBP2.33□□□□□ -2.04
C11orf88-204ENST00000529661 CPMP14384 443 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 NPPCP23582 126 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 LCN6P62502 163 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 GNG5P63218 68 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 MRPL51Q4U2R6 128 aaKnown RBP2.33□□□□□ -2.04
C11orf88-204ENST00000529661 C10orf91Q5T1B1 145 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 DCUN1D2Q6PH85 259 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 LRTM1Q9HBL6 345 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 SSR3Q9UNL2 185 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 ICOSQ9Y6W8 199 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 ADGBQ8N7X0 1667 aa2.33□□□□□ -2.04
C11orf88-204ENST00000529661 TRBV20OR9-2A0A075B6H5 130 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 TRBV19A0A075B6N1 114 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 A0A1W2PRE2 83 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 LECT2O14960 151 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 PLA2G10O15496 165 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 NDUFB2O95178 105 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 G6PCP35575 357 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 LGALS9BQ3B8N2 356 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 TMEM128Q5BJH2 165 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 LGALS9CQ6DKI2 356 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 WDR59Q6PJI9 974 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 Q6Q795 121 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 AMTNQ6UX39 209 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 Q6ZQT7 251 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 ADM2Q7Z4H4 148 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 FAM24BQ8N5W8 94 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 OR4K13Q8NH42 304 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 MAFIPQ8WZ33 124 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 C11orf40Q8WZ69 217 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 RNASE6Q93091 150 aaKnown RBP2.32□□□□□ -2.04
C11orf88-204ENST00000529661 HIST1H2BAQ96A08 127 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 TOMM6Q96B49 74 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 PLEKHB2Q96CS7 222 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 MALSU1Q96EH3 234 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 DNAJC30Q96LL9 226 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 LYSMD1Q96S90 227 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 SERPINI1Q99574 410 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 PBDC1Q9BVG4 233 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 PBOV1Q9GZY1 135 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 C11orf1Q9H5F2 150 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 ERGIC3Q9Y282 383 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 SPATA31E1Q6ZUB1 1445 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 ARAP1Q96P48 1450 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 ZNF407Q9C0G0 2248 aa2.32□□□□□ -2.04
C11orf88-204ENST00000529661 NUP210LQ5VU65 1888 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 TRAV9-1A0A075B6T8 112 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 A0A087WUU8 490 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 TMEM269A0A1B0GVZ9 245 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 DPRXA6NFQ7 191 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 E7EQ34 232 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 H3BMM0 161 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 IFNA7P01567 189 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 ZNF705DP0CH99 300 aaPredicted RBP2.31□□□□□ -2.04
C11orf88-204ENST00000529661 RPS4Y1P22090 263 aaKnown RBP2.31□□□□□ -2.04
C11orf88-204ENST00000529661 CRABP1P29762 137 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 GLRXP35754 106 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 KLF3P57682 345 aaPredicted RBP2.31□□□□□ -2.04
C11orf88-204ENST00000529661 TSPEAR-AS2P59090 65 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 DEFA1P59665 94 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 HBA1P69905 142 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 DEFB115Q30KQ5 88 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 SCGB2B2Q4G0G5 96 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 LYZL2Q7Z4W2 148 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 BPIFB6Q8NFQ5 453 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 FNDC9Q8TBE3 224 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 LMX1AQ8TE12 382 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 BORCS5Q969J3 196 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 UBE2WQ96B02 151 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 C2orf50Q96LR7 162 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 IGF2BP2-AS1Q96M15 143 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 UPK3BQ9BT76 320 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 C11orf68Q9H3H3 251 aaKnown RBP2.31□□□□□ -2.04
C11orf88-204ENST00000529661 DUSP21Q9H596 190 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 RNF122Q9H9V4 155 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 MED29Q9NX70 200 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 TVP23BQ9NYZ1 205 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 OR52A1Q9UKL2 312 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 SEC16AO15027 2179 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 ABCC12Q96J65 1359 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 ECM29Q5VYK3 1845 aa2.31□□□□□ -2.04
C11orf88-204ENST00000529661 LCTP09848 1927 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 PTPRSQ13332 1948 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 PLXNB1O43157 2135 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 DHRS12A0PJE2 317 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 A6NED7 52 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 SLC25A20O43772 301 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 PIAS1O75925 651 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 TFPTP0C1Z6 253 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 CRYBB3P26998 211 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 ATP5G3P48201 142 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 GTF2A1P52655 376 aaPredicted RBP2.3□□□□□ -2.04
C11orf88-204ENST00000529661 CCL20P78556 96 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 SURF2Q15527 256 aaPredicted RBP2.3□□□□□ -2.04
C11orf88-204ENST00000529661 SAMD13Q5VXD3 122 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 EIF4E3Q8N5X7 224 aaKnown RBP2.3□□□□□ -2.04
C11orf88-204ENST00000529661 DAND5Q8N907 189 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 LINC00304Q8N9R0 145 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms