RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ELANEP08246 267 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 PF4V1P10720 104 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 AREGP15514 252 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 PSMB8P28062 276 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 DEFA6Q01524 100 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 FOXE3Q13461 319 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 NMSQ5H8A3 153 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 PLET1Q6UQ28 207 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 COMMD1Q8N668 190 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 OR10W1Q8NGF6 305 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 OR1L8Q8NGR8 309 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 TMEM68Q96MH6 324 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 HINT2Q9BX68 163 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 KLK15Q9H2R5 256 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 NDUFA4L2Q9NRX3 87 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 FKBP11Q9NYL4 201 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 CACNG5Q9UF02 275 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 PKD1L1Q8TDX9 2849 aa10.94□□□□□ -0.66
USF1-209ENST00000529476 DUXBA0A1W2PPF3 345 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 TCRBV4S1A1TA0A5B7 111 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 ST8SIA3O43173 380 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 REG1AP05451 166 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 TRAPPC2P0DI81 140 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 TRAPPC2BP0DI82 140 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 DCTN2Q13561 401 aaKnown RBP10.93□□□□□ -0.66
USF1-209ENST00000529476 CXorf66Q5JRM2 361 aaPredicted RBP10.93□□□□□ -0.66
USF1-209ENST00000529476 KHDC1LQ5JSQ8 128 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 C19orf35Q6ZS72 473 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 ZNF429Q86V71 674 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 RNF152Q8N8N0 203 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 OR5M8Q8NGP6 311 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 OR5B3Q8NH48 314 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 COQ8AQ8NI60 647 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 FAM110DQ8TAY7 271 aaPredicted RBP10.93□□□□□ -0.66
USF1-209ENST00000529476 MS4A10Q96PG2 267 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 ZNF355PQ9NSJ1 428 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 COA4Q9NYJ1 87 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 ZNF257Q9Y2Q1 563 aa10.93□□□□□ -0.66
USF1-209ENST00000529476 PIGBOS1A0A0B4J2F0 54 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 A0A1W2PRX2 142 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 IGLC7A0M8Q6 106 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 ADARB2-AS1A8MUL3 147 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 INMT-MINDY4F8WBC2 141 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 ADAP1O75689 374 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 PTTG1O95997 202 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 PRH1P02810 166 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 HOXB5P09067 269 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
USF1-209ENST00000529476 NSUN5P1Q3KNT7 163 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 SPINK9Q5DT21 86 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 TMEM65Q6PI78 240 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 TTC9CQ8N5M4 171 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 ZNF431Q8TF32 576 aaPredicted RBP10.92□□□□□ -0.66
USF1-209ENST00000529476 MITD1Q8WV92 249 aa10.92□□□□□ -0.66
USF1-209ENST00000529476 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.92□□□□□ -0.66
USF1-209ENST00000529476 NPIPB5A8MRT5 1133 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 IFNA17P01571 189 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 IL5P05113 134 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 SULT1A3P0DMM9 295 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 SULT1A4P0DMN0 295 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 OR13C7P0DN81 318 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 PSMB6P28072 239 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 RAB9AP51151 201 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 RPL23AP62750 156 aaKnown RBP10.91□□□□□ -0.66
USF1-209ENST00000529476 PRCDQ00LT1 54 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 WT1-ASQ06250 92 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 SMCO1Q147U7 214 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 GGNBP1Q5YKI7 109 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 THOC7Q6I9Y2 204 aaKnown RBP10.91□□□□□ -0.66
USF1-209ENST00000529476 C18orf65Q6ZTR6 163 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 NDUFA11Q86Y39 141 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 MYOZ3Q8TDC0 251 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 SRSF8Q9BRL6 282 aaKnown RBP10.91□□□□□ -0.66
USF1-209ENST00000529476 MARVELD1Q9BSK0 173 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 TMED3Q9Y3Q3 217 aa10.91□□□□□ -0.66
USF1-209ENST00000529476 TSSC4Q9Y5U2 329 aaPredicted RBP10.91□□□□□ -0.66
USF1-209ENST00000529476 A0A1B0GU03 582 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 NXPH3O95157 252 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 TRGV3P03979 118 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 CRYGCP07315 174 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 CTRB1P17538 263 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 TPPP2P59282 170 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 DEFA5Q01523 94 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 KIAA0141Q14154 515 aaPredicted RBP10.9□□□□□ -0.66
USF1-209ENST00000529476 AARDQ4LEZ3 155 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 CTRB2Q6GPI1 263 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 UXS1Q8NBZ7 420 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 PDCD10Q9BUL8 212 aa10.9□□□□□ -0.66
USF1-209ENST00000529476 MPTX1A8MV57 137 aa10.89□□□□□ -0.67
USF1-209ENST00000529476 H3BUA1 57 aa10.89□□□□□ -0.67
USF1-209ENST00000529476 SPCS3P61009 180 aa10.89□□□□□ -0.67
USF1-209ENST00000529476 PRR31Q5SQ13 230 aa10.89□□□□□ -0.67
USF1-209ENST00000529476 HSD17B13Q7Z5P4 300 aaPredicted RBP10.89□□□□□ -0.67
USF1-209ENST00000529476 C12orf45Q8N5I9 185 aaPredicted RBP10.89□□□□□ -0.67
USF1-209ENST00000529476 ZNF491Q8N8L2 437 aa10.89□□□□□ -0.67
USF1-209ENST00000529476 OR1S1Q8NH92 325 aa10.89□□□□□ -0.67
USF1-209ENST00000529476 SLA2Q9H6Q3 261 aa10.89□□□□□ -0.67
USF1-209ENST00000529476 PLEKHA3Q9HB20 300 aa10.89□□□□□ -0.67
USF1-209ENST00000529476 GPN1Q9HCN4 374 aaPredicted RBP10.89□□□□□ -0.67
USF1-209ENST00000529476 ZFP57Q9NU63 452 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms