RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 LPAR6P43657 344 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 RFX2P48378 723 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 ALDH3B2P48448 385 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 CTF1Q16619 201 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 ANKRD55Q3KP44 614 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 ZNF502Q8TBZ5 544 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 CD300LFQ8TDQ1 290 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 ZNF2Q9BSG1 426 aaPredicted RBP9.75□□□□□ -0.85
CPSF1-204ENST00000529288 GGTLC1Q9BX51 225 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 QTRT1Q9BXR0 403 aaKnown RBP9.75□□□□□ -0.85
CPSF1-204ENST00000529288 NSG2Q9Y328 171 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 UFC1Q9Y3C8 167 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 LOC102724200A0A096LPH7 203 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-204ENST00000529288 TEX50A0A1B0GTY4 177 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 OR2T8A6NH00 312 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 XRCC3O43542 346 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 PGLYRP1O75594 196 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-204ENST00000529288 GABARAPO95166 117 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 GNRHRP30968 328 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 TMEM69Q5SWH9 247 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 UBAC2Q8NBM4 344 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 OR1L6Q8NGR2 347 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 OR1L8Q8NGR8 309 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 OR5H2Q8NGV7 314 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 BORCS5Q969J3 196 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 SLC25A46Q96AG3 418 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 C20orf24Q9BUV8 137 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 PLEKHA2Q9HB19 425 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 UBQLN2Q9UHD9 624 aa9.74□□□□□ -0.85
CPSF1-204ENST00000529288 A8MWP6 167 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 TGOLN2O43493 480 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 SNAPC5O75971 98 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 KRASP01116 189 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 PTBP1P26599 531 aaKnown RBP eCLIP9.73□□□□□ -0.85
CPSF1-204ENST00000529288 G6PCP35575 357 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 TAS2R20P59543 309 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 VBP1P61758 197 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 POU2AF1Q16633 256 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 UBE2NLQ5JXB2 153 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 SLC38A6Q8IZM9 456 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 SAMD12Q8N8I0 201 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 MARC2Q969Z3 335 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 MRPS26Q9BYN8 205 aaKnown RBP9.73□□□□□ -0.85
CPSF1-204ENST00000529288 COMMD9Q9P000 198 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 MRPL27Q9P0M9 148 aaKnown RBP9.73□□□□□ -0.85
CPSF1-204ENST00000529288 OR51B2Q9Y5P1 312 aa9.73□□□□□ -0.85
CPSF1-204ENST00000529288 TNCP24821 2201 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 IGHV3OR16-8A0A075B7F1 116 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 MARCH11A6NNE9 402 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 ZNF207O43670 478 aaKnown RBP9.72□□□□□ -0.85
CPSF1-204ENST00000529288 SERPINE2P07093 398 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 F2RP25116 425 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 HLA-DMAP28067 261 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 WT1-ASQ06250 92 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 KLK9Q2XQG4 91 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 PHLDA2Q53GA4 152 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 Q56UQ5 140 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 CROCCP3Q8IVE0 287 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 CMTM1Q8IZ96 169 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 OR2C3Q8N628 320 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 GDPD1Q8N9F7 314 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 VN1R17PQ8TDU5 208 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 FCAMRQ8WWV6 532 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 MOB3AQ96BX8 217 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 LYSTQ99698 3801 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 SRSF8Q9BRL6 282 aaKnown RBP9.72□□□□□ -0.85
CPSF1-204ENST00000529288 KLK9Q9UKQ9 250 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 DNAH1Q9P2D7 4330 aa9.72□□□□□ -0.85
CPSF1-204ENST00000529288 CSMD3Q7Z407 3707 aa9.71□□□□□ -0.85
CPSF1-204ENST00000529288 TRAV25A0A0B4J276 109 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 C8orf88P0DMB2 117 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 PRSS3P35030 304 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 ELLP55199 621 aaPredicted RBP9.71□□□□□ -0.86
CPSF1-204ENST00000529288 TAS2R46P59540 309 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 TSPAN5P62079 268 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 PMS2P11Q13670 270 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 THOC7Q6I9Y2 204 aaKnown RBP9.71□□□□□ -0.86
CPSF1-204ENST00000529288 LAMTOR1Q6IAA8 161 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 DHRS11Q6UWP2 260 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 OR6F1Q8NGZ6 308 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 LSM10Q969L4 123 aaKnown RBP9.71□□□□□ -0.86
CPSF1-204ENST00000529288 DGCR14Q96DF8 476 aaKnown RBP9.71□□□□□ -0.86
CPSF1-204ENST00000529288 OVOL2Q9BRP0 275 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 FXYD6Q9H0Q3 95 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 C21orf62Q9NYP8 219 aa9.71□□□□□ -0.86
CPSF1-204ENST00000529288 CXorf65A6NEN9 183 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 GPR31O00270 319 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 HRH1P35367 487 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 MFAP2P55001 183 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 GPR107Q5VW38 600 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 HSD17B13Q7Z5P4 300 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-204ENST00000529288 SCARB1Q8WTV0 552 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 TMEM190Q8WZ59 177 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 BSCL2Q96G97 398 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-204ENST00000529288 CHRDL1Q9BU40 450 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 ZNF436Q9C0F3 470 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-204ENST00000529288 NDUFA4L2Q9NRX3 87 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 COMMD3Q9UBI1 195 aa9.7□□□□□ -0.86
CPSF1-204ENST00000529288 F11RQ9Y624 299 aaKnown RBP9.7□□□□□ -0.86
CPSF1-204ENST00000529288 YIF1AO95070 293 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms