RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 BLOC1S6Q9UL45 172 aa17.41■□□□□ 0.38
CPSF1-202ENST00000527827 DEDDO75618 318 aa17.4■□□□□ 0.38
CPSF1-202ENST00000527827 FGF2P09038 288 aa17.4■□□□□ 0.38
CPSF1-202ENST00000527827 WT1-ASQ06250 92 aa17.4■□□□□ 0.38
CPSF1-202ENST00000527827 CATR1Q13166 79 aa17.4■□□□□ 0.38
CPSF1-202ENST00000527827 LAMTOR1Q6IAA8 161 aa17.4■□□□□ 0.38
CPSF1-202ENST00000527827 TPRA1Q86W33 373 aa17.4■□□□□ 0.38
CPSF1-202ENST00000527827 HOGA1Q86XE5 327 aa17.4■□□□□ 0.38
CPSF1-202ENST00000527827 PHLDA1Q8WV24 401 aaPredicted RBP17.4■□□□□ 0.38
CPSF1-202ENST00000527827 CHRDL1Q9BU40 450 aa17.4■□□□□ 0.38
CPSF1-202ENST00000527827 MAP6D1Q9H9H5 199 aa17.4■□□□□ 0.38
CPSF1-202ENST00000527827 RRP15Q9Y3B9 282 aaKnown RBP17.4■□□□□ 0.38
CPSF1-202ENST00000527827 SERPINE2P07093 398 aa17.39■□□□□ 0.37
CPSF1-202ENST00000527827 OR13C7P0DN81 318 aa17.39■□□□□ 0.37
CPSF1-202ENST00000527827 MFAP2P55001 183 aa17.39■□□□□ 0.37
CPSF1-202ENST00000527827 SFXN4Q6P4A7 337 aa17.39■□□□□ 0.37
CPSF1-202ENST00000527827 ZNF818PQ6ZRF7 136 aa17.39■□□□□ 0.37
CPSF1-202ENST00000527827 TMEM217Q8N7C4 229 aa17.39■□□□□ 0.37
CPSF1-202ENST00000527827 GALNT14Q96FL9 552 aa17.39■□□□□ 0.37
CPSF1-202ENST00000527827 BSCL2Q96G97 398 aaPredicted RBP17.39■□□□□ 0.37
CPSF1-202ENST00000527827 PLEKHA2Q9HB19 425 aa17.39■□□□□ 0.37
CPSF1-202ENST00000527827 TRAV18A0A075B6X5 111 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 IGHV3OR16-8A0A075B7F1 116 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 TEX50A0A1B0GTY4 177 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 OR4C46A6NHA9 309 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 F8W735 103 aaPredicted RBP17.38■□□□□ 0.37
CPSF1-202ENST00000527827 NDUFA4O00483 81 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 TRAPPC2P0DI81 140 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 TRAPPC2BP0DI82 140 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 FCGR2BP31994 310 aaPredicted RBP17.38■□□□□ 0.37
CPSF1-202ENST00000527827 FXYD4P59646 89 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 UBE2UQ5VVX9 321 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 SLC25A24Q6NUK1 477 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 DMBX1Q8NFW5 382 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 OR51H1Q8NH63 302 aa17.38■□□□□ 0.37
CPSF1-202ENST00000527827 IGHV3-21A0A0B4J1V1 117 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 CYB5BO43169 146 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 ZNF207O43670 478 aaKnown RBP17.37■□□□□ 0.37
CPSF1-202ENST00000527827 CTSDP07339 412 aaPredicted RBP17.37■□□□□ 0.37
CPSF1-202ENST00000527827 ADMP35318 185 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 LGALS9CQ6DKI2 356 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 THOC7Q6I9Y2 204 aaKnown RBP17.37■□□□□ 0.37
CPSF1-202ENST00000527827 SPSB3Q6PJ21 355 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 OR5H6Q8NGV6 325 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 OR5B3Q8NH48 314 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 SLC25A38Q96DW6 304 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 ZNF414Q96IQ9 312 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 ATP6V0BQ99437 205 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 C20orf24Q9BUV8 137 aa17.37■□□□□ 0.37
CPSF1-202ENST00000527827 K7EMT4 169 aa17.36■□□□□ 0.37
CPSF1-202ENST00000527827 FCER2P06734 321 aa17.36■□□□□ 0.37
CPSF1-202ENST00000527827 HSD17B13Q7Z5P4 300 aaPredicted RBP17.36■□□□□ 0.37
CPSF1-202ENST00000527827 APRG1Q8IVJ8 170 aa17.36■□□□□ 0.37
CPSF1-202ENST00000527827 CD300LFQ8TDQ1 290 aa17.36■□□□□ 0.37
CPSF1-202ENST00000527827 SCARB1Q8WTV0 552 aa17.36■□□□□ 0.37
CPSF1-202ENST00000527827 NDUFA4L2Q9NRX3 87 aa17.36■□□□□ 0.37
CPSF1-202ENST00000527827 C21orf62Q9NYP8 219 aa17.36■□□□□ 0.37
CPSF1-202ENST00000527827 COMMD9Q9P000 198 aa17.36■□□□□ 0.37
CPSF1-202ENST00000527827 F11RQ9Y624 299 aaKnown RBP17.36■□□□□ 0.37
CPSF1-202ENST00000527827 AADACL3Q5VUY0 350 aa17.35■□□□□ 0.37
CPSF1-202ENST00000527827 IZUMO2Q6UXV1 221 aa17.35■□□□□ 0.37
CPSF1-202ENST00000527827 OR1L8Q8NGR8 309 aa17.35■□□□□ 0.37
CPSF1-202ENST00000527827 GIMAP1Q8WWP7 306 aa17.35■□□□□ 0.37
CPSF1-202ENST00000527827 K7EIM0 57 aa17.34■□□□□ 0.37
CPSF1-202ENST00000527827 CLEC2LP0C7M8 214 aa17.34■□□□□ 0.37
CPSF1-202ENST00000527827 PSMB9P28065 219 aa17.34■□□□□ 0.37
CPSF1-202ENST00000527827 SDC2P34741 201 aa17.34■□□□□ 0.37
CPSF1-202ENST00000527827 ZNF124Q15973 351 aa17.34■□□□□ 0.37
CPSF1-202ENST00000527827 TMEM17Q86X19 198 aa17.34■□□□□ 0.37
CPSF1-202ENST00000527827 MARCH11A6NNE9 402 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 MRPS14O60783 128 aaKnown RBP17.33■□□□□ 0.36
CPSF1-202ENST00000527827 GNRHRP30968 328 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 HSPA13P48723 471 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 SCAND1P57086 179 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 GABARAPL2P60520 117 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 OR5AP2Q8NGF4 316 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 RNF2Q99496 336 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 HINT2Q9BX68 163 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 AUNIPQ9H7T9 357 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 SMPXQ9UHP9 88 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 SSR3Q9UNL2 185 aa17.33■□□□□ 0.36
CPSF1-202ENST00000527827 C15orf62A8K5M9 175 aa17.32■□□□□ 0.36
CPSF1-202ENST00000527827 MXD1Q05195 221 aa17.32■□□□□ 0.36
CPSF1-202ENST00000527827 SPARTQ8N0X7 666 aa17.32■□□□□ 0.36
CPSF1-202ENST00000527827 UBAC2Q8NBM4 344 aa17.32■□□□□ 0.36
CPSF1-202ENST00000527827 LSM10Q969L4 123 aaKnown RBP17.32■□□□□ 0.36
CPSF1-202ENST00000527827 CSTL1Q9H114 145 aa17.32■□□□□ 0.36
CPSF1-202ENST00000527827 NSG2Q9Y328 171 aa17.32■□□□□ 0.36
CPSF1-202ENST00000527827 ETV7Q9Y603 341 aa17.32■□□□□ 0.36
CPSF1-202ENST00000527827 A0A0A6YYH2 397 aa17.31■□□□□ 0.36
CPSF1-202ENST00000527827 A6NJ64 397 aa17.31■□□□□ 0.36
CPSF1-202ENST00000527827 CTSGP08311 255 aa17.31■□□□□ 0.36
CPSF1-202ENST00000527827 ERVK-16P61578 105 aa17.31■□□□□ 0.36
CPSF1-202ENST00000527827 Q56UQ5 140 aa17.31■□□□□ 0.36
CPSF1-202ENST00000527827 GATAD1Q8WUU5 269 aa17.31■□□□□ 0.36
CPSF1-202ENST00000527827 C6orf62Q9GZU0 229 aaPredicted RBP17.31■□□□□ 0.36
CPSF1-202ENST00000527827 VCX3BQ9H321 246 aa17.31■□□□□ 0.36
CPSF1-202ENST00000527827 RNF167Q9H6Y7 350 aa17.31■□□□□ 0.36
CPSF1-202ENST00000527827 CHEK1O14757 476 aa17.3■□□□□ 0.36
CPSF1-202ENST00000527827 F2RP25116 425 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms