RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 GGNBP1Q5YKI7 109 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 CTRB2Q6GPI1 263 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 FAM219AQ8IW50 185 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 FAM110DQ8TAY7 271 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-205ENST00000527046 ZNF431Q8TF32 576 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-205ENST00000527046 COA4Q9NYJ1 87 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 CACNG5Q9UF02 275 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 PRNDQ9UKY0 176 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 ZNF257Q9Y2Q1 563 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 A0A1W2PN81 502 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 SNAPC5O75971 98 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 PRH1P02810 166 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 TRAPPC2P0DI81 140 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 TRAPPC2BP0DI82 140 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 ANXA3P12429 323 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 CHRNA7P36544 502 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 RAB9AP51151 201 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 AKR1C2P52895 323 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 DEFA1P59665 94 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 DEFA3P59666 94 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 TMEM267Q0VDI3 215 aaPredicted RBP8.37□□□□□ -1.07
NEDD8-205ENST00000527046 IL15RAQ13261 267 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 OXA1LQ15070 435 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 C4orf46Q504U0 113 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 PVRIGQ6DKI7 326 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 TEX38Q6PEX7 206 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 C3orf56Q8N813 242 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 ZNF491Q8N8L2 437 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 OR1L8Q8NGR8 309 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 OR5B3Q8NH48 314 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 OR52E5Q8NH55 327 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 ENKURQ8TC29 256 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 OR10C1Q96KK4 312 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 TMEM68Q96MH6 324 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 FYTTD1Q96QD9 318 aaKnown RBP8.37□□□□□ -1.07
NEDD8-205ENST00000527046 SPIN2AQ99865 258 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 SPIN2BQ9BPZ2 258 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 COMMD5Q9GZQ3 224 aa8.37□□□□□ -1.07
NEDD8-205ENST00000527046 DUXBA0A1W2PPF3 345 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 NPIPB5A8MRT5 1133 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 INS-IGF2F8WCM5 200 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 CREBL2O60519 120 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-205ENST00000527046 FBXO24O75426 580 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 PTTG1O95997 202 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 HOXB5P09067 269 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 SLC25A6P12236 298 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 PSMB6P28072 239 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 SRPXP78539 464 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 PRCDQ00LT1 54 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 ID3Q02535 119 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 SPINK9Q5DT21 86 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 ARSJQ5FYB0 599 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-205ENST00000527046 CXorf66Q5JRM2 361 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-205ENST00000527046 SHISA2Q6UWI4 295 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 OR2C3Q8N628 320 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 COMMD1Q8N668 190 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 OR4A16Q8NH70 328 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 TMEM170AQ8WVE7 144 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 RRNAD1Q96FB5 475 aaKnown RBP8.36□□□□□ -1.07
NEDD8-205ENST00000527046 WDR89Q96FK6 387 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-205ENST00000527046 MS4A10Q96PG2 267 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 SRSF8Q9BRL6 282 aaKnown RBP8.36□□□□□ -1.07
NEDD8-205ENST00000527046 GON7Q9BXV9 100 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-205ENST00000527046 TMED3Q9Y3Q3 217 aa8.36□□□□□ -1.07
NEDD8-205ENST00000527046 A0A1B0GU03 582 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 C7orf66A4D0T2 115 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 ACTL6BO94805 426 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 ATG12O94817 140 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 NDUFB8O95169 186 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 REG1AP05451 166 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 SULT1A3P0DMM9 295 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 SULT1A4P0DMN0 295 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 CDX1P47902 265 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-205ENST00000527046 RPL23AP62750 156 aaKnown RBP8.35□□□□□ -1.07
NEDD8-205ENST00000527046 SLC35B1P78383 322 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 DEFA5Q01523 94 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 SMCO1Q147U7 214 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 BSXQ3C1V8 233 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 PLET1Q6UQ28 207 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 C12orf45Q8N5I9 185 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-205ENST00000527046 OR4D5Q8NGN0 318 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 OR5M8Q8NGP6 311 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 ABHD5Q8WTS1 349 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 GNB4Q9HAV0 340 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 FKBP11Q9NYL4 201 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 HSPB7Q9UBY9 170 aa8.35□□□□□ -1.07
NEDD8-205ENST00000527046 IGLV11-55A0A075B6I3 123 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 TCRBV4S1A1TA0A5B7 111 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 SNRPGP15A8MWD9 76 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 H3BUA1 57 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 I3L521 148 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 CCSO14618 274 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 NXPH3O95157 252 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 OR13C7P0DN81 318 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 PF4V1P10720 104 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 SPCS3P61009 180 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 ETV3LQ6ZN32 361 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 NDUFA11Q86Y39 141 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 COQ8AQ8NI60 647 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms