RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 LILRB2Q8N423 598 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 PIP4P2Q8N4L2 257 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 SLC24A4Q8NFF2 622 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 C17orf50Q8WW18 174 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 TMED6Q8WW62 240 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 GNPNAT1Q96EK6 184 aaPredicted RBP16.42■□□□□ 0.22
SMCO4-203ENST00000526869 TMEM147Q9BVK8 224 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 HINT2Q9BX68 163 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 TPSG1Q9NRR2 321 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 NMBP08949 121 aa16.41■□□□□ 0.22
SMCO4-203ENST00000526869 SPP1P10451 314 aa16.41■□□□□ 0.22
SMCO4-203ENST00000526869 NPY1RP25929 384 aa16.41■□□□□ 0.22
SMCO4-203ENST00000526869 MMDQ15546 238 aa16.41■□□□□ 0.22
SMCO4-203ENST00000526869 VWC2Q2TAL6 325 aa16.41■□□□□ 0.22
SMCO4-203ENST00000526869 OR8G2PQ6IF36 304 aa16.41■□□□□ 0.22
SMCO4-203ENST00000526869 GGACTQ9BVM4 153 aa16.41■□□□□ 0.22
SMCO4-203ENST00000526869 KIAA1456Q9P272 454 aa16.41■□□□□ 0.22
SMCO4-203ENST00000526869 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMCO4-203ENST00000526869 TRAV40A0A0B4J280 105 aa16.4■□□□□ 0.22
SMCO4-203ENST00000526869 LINC00862A6NCI5 91 aa16.4■□□□□ 0.22
SMCO4-203ENST00000526869 ACTL6BO94805 426 aa16.4■□□□□ 0.22
SMCO4-203ENST00000526869 FAM106CPP0CH98 169 aa16.4■□□□□ 0.22
SMCO4-203ENST00000526869 COMPP49747 757 aaPredicted RBP16.4■□□□□ 0.22
SMCO4-203ENST00000526869 RNF141Q8WVD5 230 aa16.4■□□□□ 0.22
SMCO4-203ENST00000526869 Q96MF0 132 aa16.4■□□□□ 0.22
SMCO4-203ENST00000526869 SRSF8Q9BRL6 282 aaKnown RBP16.4■□□□□ 0.22
SMCO4-203ENST00000526869 FBXL15Q9H469 300 aa16.4■□□□□ 0.22
SMCO4-203ENST00000526869 CGB1A6NKQ9 187 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 FGF16O43320 207 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 IGHV4-31P0DP07 118 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 RPL27AP46776 148 aaKnown RBP16.39■□□□□ 0.21
SMCO4-203ENST00000526869 BPIFB3P59826 476 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 ERHP84090 104 aaKnown RBP16.39■□□□□ 0.21
SMCO4-203ENST00000526869 PJVKQ0ZLH3 352 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 HES1Q14469 280 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 TMEM249Q2WGJ8 235 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 C2orf83Q53S99 150 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 FAM74A1Q5RGS3 127 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 ETV3LQ6ZN32 361 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 HSD17B13Q7Z5P4 300 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-203ENST00000526869 TMEM170AQ8WVE7 144 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 UQCC1Q9NVA1 299 aa16.39■□□□□ 0.21
SMCO4-203ENST00000526869 TNCP24821 2201 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 PRSS46E5RG02 174 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 CA2P00918 260 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 SULT1A2P50226 295 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 DLK1P80370 383 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 TNXAQ16473 311 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 C5orf64Q2M2E5 130 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 LRRC75BQ2VPJ9 315 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 HSD17B11Q8NBQ5 300 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 SCGB1C1Q8TD33 95 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 MEGF9Q9H1U4 602 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 MED9Q9NWA0 146 aa16.38■□□□□ 0.21
SMCO4-203ENST00000526869 FNDC10F2Z333 226 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 FBXO24O75426 580 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 OPN1MWP04001 364 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 OPN1MW2P0DN77 364 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 OPN1MW3P0DN78 364 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 RNASE2P10153 161 aaKnown RBP16.37■□□□□ 0.21
SMCO4-203ENST00000526869 TMEM11P17152 192 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 ATP6V0CP27449 155 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 SNCAP37840 140 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 RAB5CP51148 216 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 PLGLAQ15195 96 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 C10orf55Q5SWW7 151 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 RUSC1-AS1Q66K80 236 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 SLC25A24Q6NUK1 477 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 SAT2Q96F10 170 aaPredicted RBP16.37■□□□□ 0.21
SMCO4-203ENST00000526869 FOXC2Q99958 501 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 C1RLQ9NZP8 487 aa16.37■□□□□ 0.21
SMCO4-203ENST00000526869 A0A1B0GW64 132 aa16.36■□□□□ 0.21
SMCO4-203ENST00000526869 E7EUB6 86 aa16.36■□□□□ 0.21
SMCO4-203ENST00000526869 IFNA4P05014 189 aa16.36■□□□□ 0.21
SMCO4-203ENST00000526869 FAM157CP0CG43 387 aa16.36■□□□□ 0.21
SMCO4-203ENST00000526869 IGHV4-38-2P0DP08 117 aa16.36■□□□□ 0.21
SMCO4-203ENST00000526869 PAX6P26367 422 aa16.36■□□□□ 0.21
SMCO4-203ENST00000526869 HNF4GQ14541 408 aa16.36■□□□□ 0.21
SMCO4-203ENST00000526869 OR10W1Q8NGF6 305 aa16.36■□□□□ 0.21
SMCO4-203ENST00000526869 PSMG3Q9BT73 122 aaPredicted RBP16.36■□□□□ 0.21
SMCO4-203ENST00000526869 WDR61Q9GZS3 305 aaKnown RBP16.36■□□□□ 0.21
SMCO4-203ENST00000526869 TIMM9Q9Y5J7 89 aa16.36■□□□□ 0.21
SMCO4-203ENST00000526869 MAP1AP78559 2803 aaPredicted RBP16.36■□□□□ 0.21
SMCO4-203ENST00000526869 IGLC7A0M8Q6 106 aa16.35■□□□□ 0.21
SMCO4-203ENST00000526869 UMAD1C9J7I0 102 aa16.35■□□□□ 0.21
SMCO4-203ENST00000526869 TGFAP01135 160 aa16.35■□□□□ 0.21
SMCO4-203ENST00000526869 MDKP21741 143 aaPredicted RBP16.35■□□□□ 0.21
SMCO4-203ENST00000526869 CD24P25063 80 aa16.35■□□□□ 0.21
SMCO4-203ENST00000526869 SUB1P53999 127 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMCO4-203ENST00000526869 WT1-ASQ06250 92 aa16.35■□□□□ 0.21
SMCO4-203ENST00000526869 KLF17Q5JT82 389 aaPredicted RBP16.35■□□□□ 0.21
SMCO4-203ENST00000526869 ZNF114Q8NC26 417 aa16.35■□□□□ 0.21
SMCO4-203ENST00000526869 SH3BGRL3Q9H299 93 aa16.35■□□□□ 0.21
SMCO4-203ENST00000526869 CR1P17927 2039 aa16.35■□□□□ 0.21
SMCO4-203ENST00000526869 UBE2L5PA0A1B0GUS4 154 aa16.34■□□□□ 0.21
SMCO4-203ENST00000526869 SSBP2P81877 361 aaPredicted RBP16.34■□□□□ 0.21
SMCO4-203ENST00000526869 AANATQ16613 207 aa16.34■□□□□ 0.21
SMCO4-203ENST00000526869 PVRIGQ6DKI7 326 aa16.34■□□□□ 0.21
SMCO4-203ENST00000526869 CENPVQ7Z7K6 275 aaPredicted RBP16.34■□□□□ 0.21
SMCO4-203ENST00000526869 SLC7A5P1Q8MH63 180 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms