RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 GNB1LQ9BYB4 327 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 OR2J1Q9GZK6 312 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 YIPF3Q9GZM5 350 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 WDR61Q9GZS3 305 aaKnown RBP0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 LPAR5Q9H1C0 372 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 TCEAL2Q9H3H9 227 aaPredicted RBP0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 DUSP21Q9H596 190 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 FAM60AQ9NP50 221 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 OSTCQ9NRP0 149 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 UBQLN4Q9NRR5 601 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 SPANXA1Q9NS26 97 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 LYRM2Q9NU23 88 aaPredicted RBP0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 ACER3Q9NUN7 267 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 TVP23BQ9NYZ1 205 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 RBM12B-AS1Q9P1G2 102 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 HSPB8Q9UJY1 196 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 ANAPC10Q9UM13 185 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 EPDR1Q9UM22 224 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 CYSLTR1Q9Y271 337 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 TP53TG1Q9Y2A0 90 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 TIMM22Q9Y584 194 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 AP4S1Q9Y587 144 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 ICOSQ9Y6W8 199 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNF608Q9ULD9 1512 aaPredicted RBP0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 CCDC144AA2RUR9 1427 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 MIA2Q96PC5 1412 aa0.72□□□□□ -2.29
ECHDC1-219ENST00000526299 RTL1A6NKG5 1358 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 KIF24Q5T7B8 1368 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 AHDC1Q5TGY3 1603 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 KIAA0232Q92628 1395 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 CLUHO75153 1309 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 IGHV1-45A0A0A0MS14 117 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV3A0A0B4J244 114 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV26-2A0A0B4J265 109 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 IGHV1-69-2A0A0G2JMI3 117 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A0J9YY10 115 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 EXOC1LA0A1B0GW35 172 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1B0GX78 115 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 C20orf202A1L168 122 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MEIS3P1A6NDR6 274 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 EFCAB10A6NFE3 127 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR5H14A6NHG9 310 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 A6NIN4 97 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 FAM159BA6NKW6 160 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 RFPL4AA6NLU0 287 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR5K4A6NMS3 321 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR4C45A6NMZ5 311 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR11H12B2RN74 326 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 F6UZH7 168 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 RFPL4AL1F8VTS6 287 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 INMT-MINDY4F8WBC2 141 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 C15orf65H3BRN8 121 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 M0R129 80 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TP53I11O14683 189 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SLC25A20O43772 301 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SNCGO76070 127 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 CST7O76096 145 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 DPM2O94777 84 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 BRI3O95415 125 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 IGHG2P01859 326 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 IGHMP01871 453 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MT-ND4LP03901 98 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TRGV3P03979 118 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 BPGMP07738 259 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 C8orf88P0DMB2 117 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 PRB4P10163 310 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 ESDP10768 282 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SCGB1A1P11684 91 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 CTSEP14091 401 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BOP23527 126 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 S100PP25815 95 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MIPP30301 263 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SDC4P31431 198 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 S100A11P31949 105 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BBP33778 126 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SDC2P34741 201 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 GABRA2P47869 451 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MARCKSL1P49006 195 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF140P52738 457 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 KLF3P57682 345 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BDP58876 126 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TAS2R30P59541 319 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 CDC42P60953 191 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 PCBD1P61457 104 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 NCS1P62166 190 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BCP62807 126 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 FKBP1AP62942 108 aaKnown RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 ELF3P78545 371 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 RUNX1Q01196 453 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 EBPQ15125 230 aaKnown RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR8B8Q15620 311 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MSMO1Q15800 293 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF141Q15928 474 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST2H2BEQ16778 126 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 CEACAM16Q2WEN9 425 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 LINC00303Q3SY05 128 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 VMA21Q3ZAQ7 101 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 DEFB134Q4QY38 66 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 FAM162BQ5T6X4 162 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms