RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PHLDA1Q8WV24 401 aaPredicted RBP17.71■□□□□ 0.43
USP47-205ENST00000525257 CNBD2Q96M20 576 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 SRSF8Q9BRL6 282 aaKnown RBP17.71■□□□□ 0.43
USP47-205ENST00000525257 C20orf24Q9BUV8 137 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 TXNL4BQ9NX01 149 aaKnown RBP17.71■□□□□ 0.43
USP47-205ENST00000525257 RHBDL2Q9NX52 303 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 BLOC1S6Q9UL45 172 aa17.71■□□□□ 0.43
USP47-205ENST00000525257 HECTD4Q9Y4D8 3996 aa17.71■□□□□ 0.42
USP47-205ENST00000525257 IGHV3OR16-8A0A075B7F1 116 aa17.7■□□□□ 0.42
USP47-205ENST00000525257 IGHV3-21A0A0B4J1V1 117 aa17.7■□□□□ 0.42
USP47-205ENST00000525257 OR4C46A6NHA9 309 aa17.7■□□□□ 0.42
USP47-205ENST00000525257 CYB5BO43169 146 aa17.7■□□□□ 0.42
USP47-205ENST00000525257 SLC25A24Q6NUK1 477 aa17.7■□□□□ 0.42
USP47-205ENST00000525257 DMBX1Q8NFW5 382 aa17.7■□□□□ 0.42
USP47-205ENST00000525257 OR5B3Q8NH48 314 aa17.7■□□□□ 0.42
USP47-205ENST00000525257 OR51H1Q8NH63 302 aa17.7■□□□□ 0.42
USP47-205ENST00000525257 BSCL2Q96G97 398 aaPredicted RBP17.7■□□□□ 0.42
USP47-205ENST00000525257 RRP15Q9Y3B9 282 aaKnown RBP17.7■□□□□ 0.42
USP47-205ENST00000525257 ZNF207O43670 478 aaKnown RBP17.69■□□□□ 0.42
USP47-205ENST00000525257 FCER2P06734 321 aa17.69■□□□□ 0.42
USP47-205ENST00000525257 OR13C7P0DN81 318 aa17.69■□□□□ 0.42
USP47-205ENST00000525257 FCGR2BP31994 310 aaPredicted RBP17.69■□□□□ 0.42
USP47-205ENST00000525257 GALNT14Q96FL9 552 aa17.69■□□□□ 0.42
USP47-205ENST00000525257 CHRDL1Q9BU40 450 aa17.69■□□□□ 0.42
USP47-205ENST00000525257 SERPINE2P07093 398 aa17.68■□□□□ 0.42
USP47-205ENST00000525257 TRAPPC2P0DI81 140 aa17.68■□□□□ 0.42
USP47-205ENST00000525257 TRAPPC2BP0DI82 140 aa17.68■□□□□ 0.42
USP47-205ENST00000525257 WT1-ASQ06250 92 aa17.68■□□□□ 0.42
USP47-205ENST00000525257 SFXN4Q6P4A7 337 aa17.68■□□□□ 0.42
USP47-205ENST00000525257 ZNF818PQ6ZRF7 136 aa17.68■□□□□ 0.42
USP47-205ENST00000525257 HOGA1Q86XE5 327 aa17.68■□□□□ 0.42
USP47-205ENST00000525257 MAP6D1Q9H9H5 199 aa17.68■□□□□ 0.42
USP47-205ENST00000525257 VPS13DQ5THJ4 4388 aa17.68■□□□□ 0.42
USP47-205ENST00000525257 TRAV18A0A075B6X5 111 aa17.67■□□□□ 0.42
USP47-205ENST00000525257 NDUFA4O00483 81 aa17.67■□□□□ 0.42
USP47-205ENST00000525257 CTSDP07339 412 aaPredicted RBP17.67■□□□□ 0.42
USP47-205ENST00000525257 FGF9P31371 208 aaPredicted RBP17.67■□□□□ 0.42
USP47-205ENST00000525257 AADACL3Q5VUY0 350 aa17.67■□□□□ 0.42
USP47-205ENST00000525257 THOC7Q6I9Y2 204 aaKnown RBP17.67■□□□□ 0.42
USP47-205ENST00000525257 TMEM17Q86X19 198 aa17.67■□□□□ 0.42
USP47-205ENST00000525257 APRG1Q8IVJ8 170 aa17.67■□□□□ 0.42
USP47-205ENST00000525257 PLEKHA2Q9HB19 425 aa17.67■□□□□ 0.42
USP47-205ENST00000525257 C21orf62Q9NYP8 219 aa17.67■□□□□ 0.42
USP47-205ENST00000525257 TEX50A0A1B0GTY4 177 aa17.66■□□□□ 0.42
USP47-205ENST00000525257 MFAP2P55001 183 aa17.66■□□□□ 0.42
USP47-205ENST00000525257 LGALS9CQ6DKI2 356 aa17.66■□□□□ 0.42
USP47-205ENST00000525257 SPSB3Q6PJ21 355 aa17.66■□□□□ 0.42
USP47-205ENST00000525257 TPRA1Q86W33 373 aa17.66■□□□□ 0.42
USP47-205ENST00000525257 UBAC2Q8NBM4 344 aa17.66■□□□□ 0.42
USP47-205ENST00000525257 HINT2Q9BX68 163 aa17.66■□□□□ 0.42
USP47-205ENST00000525257 FGF2P09038 288 aa17.65■□□□□ 0.42
USP47-205ENST00000525257 PSMB9P28065 219 aa17.65■□□□□ 0.42
USP47-205ENST00000525257 ADMP35318 185 aa17.65■□□□□ 0.42
USP47-205ENST00000525257 ZNF124Q15973 351 aa17.65■□□□□ 0.42
USP47-205ENST00000525257 IZUMO2Q6UXV1 221 aa17.65■□□□□ 0.42
USP47-205ENST00000525257 OR5H6Q8NGV6 325 aa17.65■□□□□ 0.42
USP47-205ENST00000525257 CD300LFQ8TDQ1 290 aa17.65■□□□□ 0.42
USP47-205ENST00000525257 SLC25A38Q96DW6 304 aa17.65■□□□□ 0.42
USP47-205ENST00000525257 COMMD9Q9P000 198 aa17.65■□□□□ 0.42
USP47-205ENST00000525257 F11RQ9Y624 299 aaKnown RBP17.65■□□□□ 0.42
USP47-205ENST00000525257 F8W735 103 aaPredicted RBP17.64■□□□□ 0.41
USP47-205ENST00000525257 ERVK-16P61578 105 aa17.64■□□□□ 0.41
USP47-205ENST00000525257 Q56UQ5 140 aa17.64■□□□□ 0.41
USP47-205ENST00000525257 HSD17B13Q7Z5P4 300 aaPredicted RBP17.64■□□□□ 0.41
USP47-205ENST00000525257 OR1L8Q8NGR8 309 aa17.64■□□□□ 0.41
USP47-205ENST00000525257 SCARB1Q8WTV0 552 aa17.64■□□□□ 0.41
USP47-205ENST00000525257 C6orf62Q9GZU0 229 aaPredicted RBP17.64■□□□□ 0.41
USP47-205ENST00000525257 K7EMT4 169 aa17.63■□□□□ 0.41
USP47-205ENST00000525257 MXD1Q05195 221 aa17.63■□□□□ 0.41
USP47-205ENST00000525257 UBE2UQ5VVX9 321 aa17.63■□□□□ 0.41
USP47-205ENST00000525257 LSM10Q969L4 123 aaKnown RBP17.63■□□□□ 0.41
USP47-205ENST00000525257 RNF2Q99496 336 aa17.63■□□□□ 0.41
USP47-205ENST00000525257 NDUFA4L2Q9NRX3 87 aa17.63■□□□□ 0.41
USP47-205ENST00000525257 DNAH6Q9C0G6 4158 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 MARCH11A6NNE9 402 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 K7EIM0 57 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 CLEC2LP0C7M8 214 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 SDC2P34741 201 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 TFPI2P48307 235 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 HSPA13P48723 471 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 NANOS2P60321 138 aaKnown RBP17.62■□□□□ 0.41
USP47-205ENST00000525257 GIMAP1Q8WWP7 306 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 ATP6V0BQ99437 205 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 RARRES2Q99969 163 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 CSTL1Q9H114 145 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 VCX3BQ9H321 246 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 SMPXQ9UHP9 88 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 SSR3Q9UNL2 185 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 NSG2Q9Y328 171 aa17.62■□□□□ 0.41
USP47-205ENST00000525257 MEIS3P1A6NDR6 274 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 C15orf62A8K5M9 175 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 MPTX1A8MV57 137 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 RLN1P04808 185 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 GABARAPL2P60520 117 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 HERV-K104P61576 105 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 OR5AP2Q8NGF4 316 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 AUNIPQ9H7T9 357 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 FBXL17Q9UF56 701 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 OR51B2Q9Y5P1 312 aa17.61■□□□□ 0.41
USP47-205ENST00000525257 ETV7Q9Y603 341 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms