RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 ZNF436Q9C0F3 470 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-208ENST00000524533 Q9H521 79 aa12.14□□□□□ -0.47
HIF3A-208ENST00000524533 PLEKHA2Q9HB19 425 aa12.14□□□□□ -0.47
HIF3A-208ENST00000524533 COMMD9Q9P000 198 aa12.14□□□□□ -0.47
HIF3A-208ENST00000524533 MEIS3P1A6NDR6 274 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 RPA2P15927 270 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 ERVK-16P61578 105 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 SLC38A6Q8IZM9 456 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 OR2C3Q8N628 320 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 VN1R17PQ8TDU5 208 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 GIMAP1Q8WWP7 306 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 BORCS5Q969J3 196 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 SPAG8Q99932 426 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-208ENST00000524533 YTHDF1Q9BYJ9 559 aaKnown RBP12.13□□□□□ -0.47
HIF3A-208ENST00000524533 IFT46Q9NQC8 304 aa12.13□□□□□ -0.47
HIF3A-208ENST00000524533 OR2T8A6NH00 312 aa12.12□□□□□ -0.47
HIF3A-208ENST00000524533 MARCH11A6NNE9 402 aa12.12□□□□□ -0.47
HIF3A-208ENST00000524533 TRAPPC2P0DI81 140 aa12.12□□□□□ -0.47
HIF3A-208ENST00000524533 TRAPPC2BP0DI82 140 aa12.12□□□□□ -0.47
HIF3A-208ENST00000524533 OR13C7P0DN81 318 aa12.12□□□□□ -0.47
HIF3A-208ENST00000524533 PMS2P11Q13670 270 aa12.12□□□□□ -0.47
HIF3A-208ENST00000524533 HSD17B13Q7Z5P4 300 aaPredicted RBP12.12□□□□□ -0.47
HIF3A-208ENST00000524533 C5orf66Q9H5L9 145 aa12.12□□□□□ -0.47
HIF3A-208ENST00000524533 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
HIF3A-208ENST00000524533 EHFQ9NZC4 300 aa12.12□□□□□ -0.47
HIF3A-208ENST00000524533 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
HIF3A-208ENST00000524533 CXorf65A6NEN9 183 aa12.11□□□□□ -0.47
HIF3A-208ENST00000524533 RLN1P04808 185 aa12.11□□□□□ -0.47
HIF3A-208ENST00000524533 SERPINE2P07093 398 aa12.11□□□□□ -0.47
HIF3A-208ENST00000524533 APOC4P55056 127 aa12.11□□□□□ -0.47
HIF3A-208ENST00000524533 WT1-ASQ06250 92 aa12.11□□□□□ -0.47
HIF3A-208ENST00000524533 SLC25A24Q6NUK1 477 aa12.11□□□□□ -0.47
HIF3A-208ENST00000524533 OR1L8Q8NGR8 309 aa12.11□□□□□ -0.47
HIF3A-208ENST00000524533 LINC00476Q8WZB0 136 aa12.11□□□□□ -0.47
HIF3A-208ENST00000524533 BSCL2Q96G97 398 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-208ENST00000524533 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
HIF3A-208ENST00000524533 A0A0J9YWU9 116 aa12.1□□□□□ -0.47
HIF3A-208ENST00000524533 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
HIF3A-208ENST00000524533 TSPAN4O14817 238 aa12.1□□□□□ -0.47
HIF3A-208ENST00000524533 ATP6V1G2O95670 118 aa12.1□□□□□ -0.47
HIF3A-208ENST00000524533 F2RP25116 425 aa12.1□□□□□ -0.47
HIF3A-208ENST00000524533 GNRHRP30968 328 aa12.1□□□□□ -0.47
HIF3A-208ENST00000524533 NEDD8Q15843 81 aa12.1□□□□□ -0.47
HIF3A-208ENST00000524533 SPSB3Q6PJ21 355 aa12.1□□□□□ -0.47
HIF3A-208ENST00000524533 LSM10Q969L4 123 aaKnown RBP12.1□□□□□ -0.47
HIF3A-208ENST00000524533 TP53TG1Q9Y2A0 90 aa12.1□□□□□ -0.47
HIF3A-208ENST00000524533 F11RQ9Y624 299 aaKnown RBP12.1□□□□□ -0.47
HIF3A-208ENST00000524533 IGHV3-21A0A0B4J1V1 117 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 NDUFA4O00483 81 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 XRCC3O43542 346 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 SPRY2O43597 315 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 TMEM127O75204 238 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 DEFB135Q30KP9 77 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 LAMTOR1Q6IAA8 161 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 Q6ZWC4 215 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 LYG2Q86SG7 212 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 WFDC3Q8IUB2 231 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 MOB3AQ96BX8 217 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 ATP6V0BQ99437 205 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 ZNF2Q9BSG1 426 aaPredicted RBP12.09□□□□□ -0.47
HIF3A-208ENST00000524533 C20orf24Q9BUV8 137 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 NDUFA4L2Q9NRX3 87 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 C21orf62Q9NYP8 219 aa12.09□□□□□ -0.47
HIF3A-208ENST00000524533 NUPR2A6NF83 97 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 OR4C46A6NHA9 309 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 PGLYRP1O75594 196 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-208ENST00000524533 KRASP01116 189 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 BMI1P35226 326 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 LPAR6P43657 344 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 RFX2P48378 723 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 MFAP2P55001 183 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 TAS2R46P59540 309 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 TNFRSF9Q07011 255 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 ODF3L2Q3SX64 289 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 UBE2NLQ5JXB2 153 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 UBAC2Q8NBM4 344 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 TSPAN14Q8NG11 270 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 FCAMRQ8WWV6 532 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 S100A16Q96FQ6 103 aaKnown RBP12.08□□□□□ -0.48
HIF3A-208ENST00000524533 CHRDL1Q9BU40 450 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 FXYD6Q9H0Q3 95 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 NSG2Q9Y328 171 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 OR51B2Q9Y5P1 312 aa12.08□□□□□ -0.48
HIF3A-208ENST00000524533 IGHV3OR16-8A0A075B7F1 116 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 UBE2CO00762 179 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 SNAPC5O75971 98 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 LY6G6CO95867 125 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 PMP2P02689 132 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 G6PCP35575 357 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 EWSR1Q01844 656 aaKnown RBP eCLIP12.07□□□□□ -0.48
HIF3A-208ENST00000524533 Q56UQ5 140 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 TMEM69Q5SWH9 247 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 DHRS11Q6UWP2 260 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 CROCCP3Q8IVE0 287 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 CMTM1Q8IZ96 169 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 STPG3Q8N7X2 389 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 OR5H2Q8NGV7 314 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 SCARB1Q8WTV0 552 aa12.07□□□□□ -0.48
HIF3A-208ENST00000524533 DGCR14Q96DF8 476 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms