RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 CITED2Q99967 270 aaPredicted RBP13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 PALMDQ9NP74 551 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 ZNF355PQ9NSJ1 428 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 TBC1D24Q9ULP9 559 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 FBXO7Q9Y3I1 522 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 NPIPB5A8MRT5 1133 aa13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 IGKV1-5P01602 117 aa13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 HLA-AP01891 365 aaKnown RBP13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 OR4E1P0C645 316 aa13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 HIST1H1BP16401 226 aaKnown RBP13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 HSPE1P61604 102 aaKnown RBP13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 PPP1R1AQ13522 171 aa13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 C11orf44Q8N8P7 122 aa13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 USMG5Q96IX5 58 aa13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 COA4Q9NYJ1 87 aa13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 TMED3Q9Y3Q3 217 aa13.74□□□□□ -0.21
PACSIN3-202ENST00000524509 TEX50A0A1B0GTY4 177 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 DUS4LO95620 317 aaKnown RBP13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 H2AFB2P0C5Z0 115 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 P0C879 139 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 DEFA4P12838 97 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 RPL23AP62750 156 aaKnown RBP13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 PLET1Q6UQ28 207 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 LYG2Q86SG7 212 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 DUSP18Q8NEJ0 188 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 OR5T1Q8NG75 326 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 OR52E5Q8NH55 327 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 NDUFA4L2Q9NRX3 87 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 NUDT15Q9NV35 164 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 THYN1Q9P016 225 aa13.73□□□□□ -0.21
PACSIN3-202ENST00000524509 TRAV3A0A0B4J244 114 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 A0A1B0GU03 582 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 C9orf170A2RU37 121 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 NUDT19A8MXV4 375 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 TEX22C9J3V5 150 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 IFNA21P01568 189 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 IFNA17P01571 189 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 CRYGCP07315 174 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 SULT1A3P0DMM9 295 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 SULT1A4P0DMN0 295 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 SLC25A6P12236 298 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 PSMB6P28072 239 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 ERHP84090 104 aaKnown RBP13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 TCTEX1D4Q5JR98 221 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 SLC35G3Q8N808 338 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 CASTOR1Q8WTX7 329 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 ENY2Q9NPA8 101 aa13.72□□□□□ -0.21
PACSIN3-202ENST00000524509 C13orf42A0A1B0GVH6 325 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 FAM223BA6NKX1 122 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 TRGV3P03979 118 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 RPLP1P05386 114 aaKnown RBP13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 MECP2P51608 486 aaKnown RBP13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 TPPP2P59282 170 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 SPCS3P61009 180 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 PRCDQ00LT1 54 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 DHRS2Q13268 280 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 NSUN5P1Q3KNT7 163 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 C10orf55Q5SWW7 151 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 C10orf99Q6UWK7 81 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 C1QL4Q86Z23 238 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 FAM223AQ8IWN6 122 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 MYOZ3Q8TDC0 251 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 HINT2Q9BX68 163 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 PLEKHA3Q9HB20 300 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 GPN1Q9HCN4 374 aaPredicted RBP13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 FLVCR2Q9UPI3 526 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 NSG2Q9Y328 171 aa13.71□□□□□ -0.21
PACSIN3-202ENST00000524509 A0A0B4J293 547 aa13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 PRAF2O60831 178 aa13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 ANXA7P20073 488 aaKnown RBP13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 SUB1P53999 127 aaKnown RBP eCLIP13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 SMCO1Q147U7 214 aa13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 AARDQ4LEZ3 155 aa13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 ASPHD1Q5U4P2 390 aa13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 ZNF491Q8N8L2 437 aa13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 LHFPL5Q8TAF8 219 aa13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 C4orf3Q8WVX3 66 aa13.7□□□□□ -0.22
PACSIN3-202ENST00000524509 KMT2CQ8NEZ4 4911 aaKnown RBP13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 TRAV6A0A075B6T7 132 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 INS-IGF2F8WCM5 200 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 SOX15O60248 233 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 LY86O95711 162 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 IL5P05113 134 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 OR13C7P0DN81 318 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 CTRB1P17538 263 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 RUNX1Q01196 453 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 IFITM3Q01628 133 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 CTRB2Q6GPI1 263 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 LYZL2Q7Z4W2 148 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 KLHL30-AS1Q8NEE0 82 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 MITD1Q8WV92 249 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 GPR146Q96CH1 333 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 CACNG5Q9UF02 275 aa13.69□□□□□ -0.22
PACSIN3-202ENST00000524509 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
PACSIN3-202ENST00000524509 ST8SIA3O43173 380 aa13.68□□□□□ -0.22
PACSIN3-202ENST00000524509 PTTG1O95997 202 aa13.68□□□□□ -0.22
PACSIN3-202ENST00000524509 APELAP0DMC3 54 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms