RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 HOXB4P17483 251 aaPredicted RBP8.05□□□□□ -1.12
VPS13B-212ENST00000524330 ZFP36P26651 326 aaKnown RBP8.05□□□□□ -1.12
VPS13B-212ENST00000524330 PPT1P50897 306 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 RUNX1Q01196 453 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 ARL16Q0P5N6 197 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 DIAPH2-AS1Q14236 149 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 TNXAQ16473 311 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 PRSS8Q16651 343 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 TEPPQ6URK8 271 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 PPP1R27Q86WC6 154 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 LYPD6BQ8NI32 183 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 PERPQ96FX8 193 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 ACTR3CQ9C0K3 210 aaPredicted RBP8.05□□□□□ -1.12
VPS13B-212ENST00000524330 ZNF430Q9H8G1 570 aaPredicted RBP8.05□□□□□ -1.12
VPS13B-212ENST00000524330 SLC39A9Q9NUM3 307 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 SIGLEC9Q9Y336 463 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 HILPDAQ9Y5L2 63 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 LAMA5O15230 3695 aa8.05□□□□□ -1.12
VPS13B-212ENST00000524330 TRAV1-1A0A0B4J248 108 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 TRAV20A0A0B4J274 112 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 A0A1B0GW64 132 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 A1L4Q6 167 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 B4DSR2 109 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 VENTXO95231 258 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 CNIH1O95406 144 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 MT-CO2P00403 227 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 OPRK1P41145 380 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 PAX2Q02962 417 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 HABP2Q14520 560 aaPredicted RBP8.04□□□□□ -1.12
VPS13B-212ENST00000524330 MMDQ15546 238 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 CLEC12BQ2HXU8 276 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 FFAR4Q5NUL3 377 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 ZNF787Q6DD87 383 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 RBMS3Q6XE24 437 aaKnown RBP8.04□□□□□ -1.12
VPS13B-212ENST00000524330 LRRC75A-AS1Q8N1F1 130 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 SFT2D1Q8WV19 159 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 RSG1Q9BU20 258 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 NPCDR1Q9BY65 106 aa8.04□□□□□ -1.12
VPS13B-212ENST00000524330 EIF5A2Q9GZV4 153 aaKnown RBP8.04□□□□□ -1.12
VPS13B-212ENST00000524330 CTXND1A0A1B0GTU2 59 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 A0A1W2PPV4 95 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 RNASEK-C17orf49H0YIS7 233 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 SCGB2A1O75556 95 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 IGKV1D-33P01593 117 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 IGKV1-33P01594 117 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 OPN1MWP04001 364 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 CRYGBP07316 175 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 RNF224P0DH78 156 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 OPN1MW2P0DN77 364 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 OPN1MW3P0DN78 364 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 OR13C7P0DN81 318 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 RNASE2P10153 161 aaKnown RBP8.03□□□□□ -1.12
VPS13B-212ENST00000524330 M6PRP20645 277 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 PAX8Q06710 450 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 KLRD1Q13241 179 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 SSX2Q16385 188 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 GUK1Q16774 197 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 TUSC1Q2TAM9 212 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 HCP5Q6MZN7 132 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 NPBQ8NG41 125 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 NANPQ8TBE9 248 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 ABHD5Q8WTS1 349 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 MBD3L1Q8WWY6 194 aa8.03□□□□□ -1.12
VPS13B-212ENST00000524330 TMEM218A2RU14 115 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 F8W036 122 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 NPFFO15130 113 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 FABP1P07148 127 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 MSMBP08118 114 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 TMEM11P17152 192 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 ELLP55199 621 aaPredicted RBP8.02□□□□□ -1.13
VPS13B-212ENST00000524330 GNB1P62873 340 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 CD69Q07108 199 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 HNF4GQ14541 408 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 BSXQ3C1V8 233 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 TMEM144Q7Z5S9 345 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 SVBPQ8N300 66 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 ZNF114Q8NC26 417 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 BPIFCQ8NFQ6 507 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 OR10G4Q8NGN3 311 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 OR10G9Q8NGN4 311 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 OR10G7Q8NGN6 311 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 CFHR4Q92496 578 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.13
VPS13B-212ENST00000524330 TBX15Q96SF7 602 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 RNF2Q99496 336 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 C19orf24Q9BVV8 132 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 RPRMQ9NS64 109 aa8.02□□□□□ -1.13
VPS13B-212ENST00000524330 IGHV4-61A0A0C4DH41 118 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 A0A1W2PRD5 423 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 A0A1W2PRF3 423 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 A0A1W2PRM7 423 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 MAP1LC3B2A6NCE7 125 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 RBFOX3A6NFN3 312 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 FAM157AC9JC47 383 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 J3QLI3 93 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 AGPAT2O15120 278 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 NDUFA3O95167 84 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 MDKP21741 143 aaPredicted RBP8.01□□□□□ -1.13
VPS13B-212ENST00000524330 RPL29P47914 159 aaKnown RBP8.01□□□□□ -1.13
VPS13B-212ENST00000524330 CDC34P49427 236 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms