RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 OR2AT4A6NND4 320 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 RIIAD1A6NNX1 92 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CD300LBA8K4G0 201 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 EFCAB9A8MZ26 197 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 K7EN84 100 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 K7ERS5 55 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 OR2T1O43869 369 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 FADS2O95864 444 aaKnown RBP2.02□□□□□ -2.09
SKP1-212ENST00000523966 EPPINO95925 133 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 IFNGP01579 166 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 SCGB1C2P0DMR2 95 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 PIPP12273 146 aaPredicted RBP2.02□□□□□ -2.09
SKP1-212ENST00000523966 CCL4P13236 92 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 MYL12AP19105 171 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CSRP1P21291 193 aaKnown RBP2.02□□□□□ -2.09
SKP1-212ENST00000523966 ELK4P28324 431 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 EVI2BP34910 448 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 OMPP47874 163 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 ETV1P50549 477 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 POLR2HP52434 150 aaKnown RBP2.02□□□□□ -2.09
SKP1-212ENST00000523966 TMBIM6P55061 237 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 SLC35A2P78381 396 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 PLCXD2Q0VAA5 305 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 SKP2Q13309 424 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 APOFQ13790 326 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 MAPK14Q16539 360 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CLEC12AQ5QGZ9 265 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 C12orf73Q69YU5 71 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 DGAT2L6Q6ZPD8 337 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 SSX6Q7RTT6 188 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 GRINAQ7Z429 371 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 GID4Q8IVV7 300 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 STX19Q8N4C7 294 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 BPIFB6Q8NFQ5 453 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 OR4D11Q8NGI4 311 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 OR9Q1Q8NGQ5 310 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 OR6K3Q8NGY3 331 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 ZNF563Q8TA94 476 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CMTM2Q8TAZ6 248 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 SCGB1C1Q8TD33 95 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 RAB2BQ8WUD1 216 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 RORBQ92753 470 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 NIPSNAP1Q9BPW8 284 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 ANAPC13Q9BS18 74 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 ZNF426Q9BUY5 554 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CDCA4Q9BXL8 241 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CCDC90BQ9GZT6 254 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 VSIRQ9H7M9 311 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 ASF1BQ9NVP2 202 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 ERGIC3Q9Y282 383 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 ZNF337Q9Y3M9 751 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 COL27A1Q8IZC6 1860 aaPredicted RBP2.02□□□□□ -2.09
SKP1-212ENST00000523966 COL5A1P20908 1838 aaPredicted RBP2.02□□□□□ -2.09
SKP1-212ENST00000523966 MED13Q9UHV7 2174 aa2.02□□□□□ -2.09
SKP1-212ENST00000523966 CACNA1GO43497 2377 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 LAMA1P25391 3075 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 MED12Q93074 2177 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 TRAV36DV7A0A075B6V5 113 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 IGLV3-32A0A0A0MS00 114 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 IGHV1-45A0A0A0MS14 117 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 VGLL3A8MV65 326 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 LEUTXA8MZ59 168 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.01□□□□□ -2.09
SKP1-212ENST00000523966 SLC22A1O15245 554 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 FADS1O60427 444 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 KLF7O75840 302 aaPredicted RBP2.01□□□□□ -2.09
SKP1-212ENST00000523966 SC5DO75845 299 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 OR2J2O76002 312 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 NDUFB2O95178 105 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 SOX14O95416 240 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 IGKV1D-16P01601 117 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 CLPSP04118 112 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 SERPINA7P05543 415 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 CD14P08571 375 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 PTHLHP12272 177 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 IFI30P13284 250 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 ZNF3P17036 446 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 PRTN3P24158 256 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 PSMA1P25786 263 aaKnown RBP2.01□□□□□ -2.09
SKP1-212ENST00000523966 SERPINB10P48595 397 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 BLVRAP53004 296 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 RAB25P57735 213 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 HOXC5Q00444 222 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 EMX1Q04741 257 aaPredicted RBP2.01□□□□□ -2.09
SKP1-212ENST00000523966 GPR176Q14439 515 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 NEDD8Q15843 81 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 NNATQ16517 81 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 ZNF791Q3KP31 576 aaPredicted RBP2.01□□□□□ -2.09
SKP1-212ENST00000523966 ZNF404Q494X3 552 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 HES3Q5TGS1 186 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 AADACL4Q5VUY2 407 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 NXNL2Q5VZ03 156 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 SMARCD3Q6STE5 483 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 BRD3OSQ6XYD6 125 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 LINC00299Q6ZSB3 139 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 AHSA2Q719I0 299 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 OLIG3Q7RTU3 272 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 TMEM144Q7Z5S9 345 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 MARCH3Q86UD3 253 aa2.01□□□□□ -2.09
SKP1-212ENST00000523966 COMTD1Q86VU5 262 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms