RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 COL4A3Q01955 1670 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 WT1P19544 449 aaPredicted RBP10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 NOL4LQ96MY1 436 aaPredicted RBP10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 DNAJC4Q9NNZ3 241 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 S4R3C0 116 aa10.91□□□□□ -0.66
PCDHGB1-201ENST00000523390 LOXL3P58215 753 aa10.9□□□□□ -0.66
PCDHGB1-201ENST00000523390 TFF3Q07654 80 aa10.9□□□□□ -0.66
PCDHGB1-201ENST00000523390 RNASEKQ6P5S7 137 aaKnown RBP10.9□□□□□ -0.66
PCDHGB1-201ENST00000523390 STPG3Q8N7X2 389 aa10.9□□□□□ -0.66
PCDHGB1-201ENST00000523390 SGMS2Q8NHU3 365 aa10.9□□□□□ -0.66
PCDHGB1-201ENST00000523390 CSPG4Q6UVK1 2322 aa10.9□□□□□ -0.66
PCDHGB1-201ENST00000523390 SLC35B1P78383 322 aa10.9□□□□□ -0.67
PCDHGB1-201ENST00000523390 CD177Q8N6Q3 437 aa10.9□□□□□ -0.67
PCDHGB1-201ENST00000523390 OR1L6Q8NGR2 347 aa10.9□□□□□ -0.67
PCDHGB1-201ENST00000523390 PGPA6NDG6 321 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGKV3-15P01624 115 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 CD24P25063 80 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 UNQ6494/PRO21346Q6UXR6 183 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 FA2HQ7L5A8 372 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 CBLN4Q9NTU7 201 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 FUT9Q9Y231 359 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 DPRXA6NFQ7 191 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 RRHO14718 337 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGKV1D-33P01593 117 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGKV1-33P01594 117 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 ORM1P02763 201 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 C8orf88P0DMB2 117 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 FCGR2BP31994 310 aaPredicted RBP10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 PSMG3Q9BT73 122 aaPredicted RBP10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 ZNF503-AS2A6NEH8 195 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 CSN3P07498 182 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 ACAA1P09110 424 aaPredicted RBP10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 SMIM17P0DL12 118 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 RSPO1Q2MKA7 263 aaPredicted RBP10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 COLCA1Q6ZS62 124 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 SGK494Q96LW2 274 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 K7ENP7 123 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 DUTP33316 252 aaKnown RBP10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 MFAP4P55083 255 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 TPPP2P59282 170 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 HLA-DRB5Q30154 266 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 NPCDR1Q9BY65 106 aa10.89□□□□□ -0.67
PCDHGB1-201ENST00000523390 NPIPB11E5RHQ5 1161 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 SAA1P0DJI8 122 aaPredicted RBP10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 HIST1H1BP16401 226 aaKnown RBP10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 IER3P46695 156 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 COL25A1Q9BXS0 654 aaPredicted RBP10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 AP4M1O00189 453 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 CD55P08174 381 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 PMS2P11Q13670 270 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 FAM162BQ5T6X4 162 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 PRO1933Q9H354 126 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 PRO3102Q9H379 93 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 ADAMTS9Q9P2N4 1935 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 CRISP2P16562 243 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGFBP2P18065 325 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 ID3Q02535 119 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 ZNF672Q499Z4 452 aaPredicted RBP10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 BIVMQ86UB2 503 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 ZNF525Q8N782 197 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 FAM168AQ92567 244 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 NEUROG1Q92886 237 aa10.88□□□□□ -0.67
PCDHGB1-201ENST00000523390 LRRC75BQ2VPJ9 315 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 BPIFA4PQ86YQ2 179 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 ZNF253O75346 499 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 GATA2P23769 480 aaPredicted RBP10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 EIF4E3Q8N5X7 224 aaKnown RBP10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 C5orf17Q8NAS9 161 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 TMEM208Q9BTX3 173 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 TMEM133Q9H2Q1 129 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 TLN1Q9Y490 2541 aaKnown RBP10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 NCOA6Q14686 2063 aaPredicted RBP10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGHV3OR16-13A0A075B7E8 117 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGHV3-74A0A0B4J1X5 117 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 SNURFLB1AK76 121 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 IL6RP08887 468 aaPredicted RBP10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 CRYBB3P26998 211 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 Q6P435 159 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 WDR73Q6P4I2 378 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 OR51G1Q8NGK1 321 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 C1orf147Q96MC9 270 aaPredicted RBP10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 IFI27L2Q9H2X8 130 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 PTPN13Q12923 2485 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 LINC00587B1AMM8 73 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 LY6HO94772 140 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 NBL1P41271 181 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 AMTP48728 403 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 PITPNC1Q9UKF7 332 aa10.87□□□□□ -0.67
PCDHGB1-201ENST00000523390 OR2J3O76001 311 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 THBDP07204 575 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 SMIM6P0DI80 62 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 TFPI2P48307 235 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 COMPP49747 757 aaPredicted RBP10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 RPL30P62888 115 aaKnown RBP10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 TCF15Q12870 199 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms