RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 KLK9Q2XQG4 91 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 OR5B3Q8NH48 314 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 CHRDL1Q9BU40 450 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 AUNIPQ9H7T9 357 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 KLK9Q9UKQ9 250 aa11.46□□□□□ -0.57
MRPS28-209ENST00000522987 TRAV25A0A0B4J276 109 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 SPRY2O43597 315 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 TRAPPC2P0DI81 140 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 TRAPPC2BP0DI82 140 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 PTBP1P26599 531 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■■■■□ 25.1
MRPS28-209ENST00000522987 TGFBR1P36897 503 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 ZNF124Q15973 351 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 ODF3L2Q3SX64 289 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 SLC38A6Q8IZM9 456 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 GDPD1Q8N9F7 314 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 ZBTB34Q8NCN2 500 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 TMEM190Q8WZ59 177 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 MARC2Q969Z3 335 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 AIFM2Q9BRQ8 373 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 ZNF436Q9C0F3 470 aaPredicted RBP11.45□□□□□ -0.58
MRPS28-209ENST00000522987 IFT46Q9NQC8 304 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 EHFQ9NZC4 300 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 THYN1Q9P016 225 aa11.45□□□□□ -0.58
MRPS28-209ENST00000522987 IGKV3-7A0A075B6H7 116 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 RBFOX2O43251 390 aaKnown RBP eCLIP11.44□□□□□ -0.58
MRPS28-209ENST00000522987 SERPINE2P07093 398 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 LPAR6P43657 344 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 TFPI2P48307 235 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 RFX2P48378 723 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 ERVK-16P61578 105 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 NEDD8Q15843 81 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 POU2AF1Q16633 256 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 OR5AP2Q8NGF4 316 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 FCGR1BQ92637 280 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 DIABLOQ9NR28 239 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 ETV7Q9Y603 341 aa11.44□□□□□ -0.58
MRPS28-209ENST00000522987 KRASP01116 189 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 PMP2P02689 132 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 CTSDP07339 412 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-209ENST00000522987 GNRHRP30968 328 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 FCGR2BP31994 310 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-209ENST00000522987 G6PCP35575 357 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 APOC4P55056 127 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 ELLP55199 621 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-209ENST00000522987 MSMO1Q15800 293 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 Q56UQ5 140 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 APRG1Q8IVJ8 170 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 OR1L8Q8NGR8 309 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 VN1R17PQ8TDU5 208 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-209ENST00000522987 ZNF2Q9BSG1 426 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-209ENST00000522987 C5orf66Q9H5L9 145 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 PLEKHA2Q9HB19 425 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 C21orf62Q9NYP8 219 aa11.43□□□□□ -0.58
MRPS28-209ENST00000522987 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 MARCH11A6NNE9 402 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 TSPAN4O14817 238 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 MRPS14O60783 128 aaKnown RBP11.42□□□□□ -0.58
MRPS28-209ENST00000522987 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 ADMP35318 185 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 CEMP1Q6PRD7 247 aaPredicted RBP11.42□□□□□ -0.58
MRPS28-209ENST00000522987 STPG3Q8N7X2 389 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 SCARB1Q8WTV0 552 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 GIMAP1Q8WWP7 306 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 FCAMRQ8WWV6 532 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 DAZ1Q9NQZ3 744 aaKnown RBP11.42□□□□□ -0.58
MRPS28-209ENST00000522987 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 OR51B2Q9Y5P1 312 aa11.42□□□□□ -0.58
MRPS28-209ENST00000522987 AGRNO00468 2067 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 NUPR2A6NF83 97 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 DBX1A6NMT0 343 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 F8W735 103 aaPredicted RBP11.41□□□□□ -0.58
MRPS28-209ENST00000522987 PGLYRP1O75594 196 aaPredicted RBP11.41□□□□□ -0.58
MRPS28-209ENST00000522987 BMI1P35226 326 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 TNFRSF9Q07011 255 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 PHLDA2Q53GA4 152 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 LAMTOR1Q6IAA8 161 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 RPP25LQ8N5L8 163 aaKnown RBP11.41□□□□□ -0.58
MRPS28-209ENST00000522987 TSPAN14Q8NG11 270 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 BSCL2Q96G97 398 aaPredicted RBP11.41□□□□□ -0.58
MRPS28-209ENST00000522987 FXYD6Q9H0Q3 95 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 NDUFA4L2Q9NRX3 87 aa11.41□□□□□ -0.58
MRPS28-209ENST00000522987 F11RQ9Y624 299 aaKnown RBP11.41□□□□□ -0.58
MRPS28-209ENST00000522987 K7EIM0 57 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 NDUFA4O00483 81 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 CYB5BO43169 146 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 DEDDO75618 318 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 F2RP25116 425 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 CBX5P45973 191 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 Q6ZWC4 215 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 WFDC3Q8IUB2 231 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 GBGT1Q8N5D6 347 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 CD300LFQ8TDQ1 290 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 LSM10Q969L4 123 aaKnown RBP11.4□□□□□ -0.58
MRPS28-209ENST00000522987 RNF183Q96D59 192 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 MISP3Q96FF7 219 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 RNF2Q99496 336 aa11.4□□□□□ -0.58
MRPS28-209ENST00000522987 SRSF8Q9BRL6 282 aaKnown RBP11.4□□□□□ -0.58
MRPS28-209ENST00000522987 A0A0A6YYH2 397 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms