RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 PRSS8Q16651 343 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 CLLU1Q5K131 121 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 FAM120AOSQ5T036 256 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 OR1L8Q8NGR8 309 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 TMEM170AQ8WVE7 144 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 ARV1Q9H2C2 271 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 RFNGQ9Y644 331 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 MAP1AP78559 2803 aaPredicted RBP12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 CGB1A6NKQ9 187 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 DFFBO76075 338 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 RPP30P78346 268 aaKnown RBP12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 PPP1R27Q86WC6 154 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 STPG2Q8N412 459 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 SLC24A4Q8NFF2 622 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 OR10P1Q8NGE3 313 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 OR2T10Q8NGZ9 312 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 RNF5Q99942 180 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 GINS3Q9BRX5 216 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 NDUFA4L2Q9NRX3 87 aa12.36□□□□□ -0.43
CTNNA1-236ENST00000522792 NAV2Q8IVL1 2488 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 NBR2O15453 112 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 LY86O95711 162 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 TGFAP01135 160 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 AVPP01185 164 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 NMBP08949 121 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 RUNX1Q01196 453 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 SLC25A24Q6NUK1 477 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 MMD2Q8IY49 270 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 SLC25A32Q9H2D1 315 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 SVEP1Q4LDE5 3571 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 UBE2L5PA0A1B0GUS4 154 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 A0A1B0GW64 132 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 FCN1O00602 326 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 CA2P00918 260 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 NPY1RP25929 384 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 ETV3LQ6ZN32 361 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 CXorf58Q96LI9 332 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 KRTAP3-3Q9BYR6 98 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 KRTAP3-2Q9BYR7 98 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 PLA2G2EQ9NZK7 142 aa12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 SOX21Q9Y651 276 aaPredicted RBP12.35□□□□□ -0.43
CTNNA1-236ENST00000522792 ACTL6BO94805 426 aa12.34□□□□□ -0.43
CTNNA1-236ENST00000522792 IFNA5P01569 189 aa12.34□□□□□ -0.43
CTNNA1-236ENST00000522792 IFNA4P05014 189 aa12.34□□□□□ -0.43
CTNNA1-236ENST00000522792 IGHV4-31P0DP07 118 aa12.34□□□□□ -0.43
CTNNA1-236ENST00000522792 TMEM11P17152 192 aa12.34□□□□□ -0.43
CTNNA1-236ENST00000522792 ATP6V0CP27449 155 aa12.34□□□□□ -0.43
CTNNA1-236ENST00000522792 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
CTNNA1-236ENST00000522792 KIAA1456Q9P272 454 aa12.34□□□□□ -0.43
CTNNA1-236ENST00000522792 TNCP24821 2201 aa12.34□□□□□ -0.43
CTNNA1-236ENST00000522792 A0A0U1RQK1 487 aa12.33□□□□□ -0.43
CTNNA1-236ENST00000522792 APELAP0DMC3 54 aa12.33□□□□□ -0.43
CTNNA1-236ENST00000522792 SPP1P10451 314 aa12.33□□□□□ -0.43
CTNNA1-236ENST00000522792 GATA3P23771 443 aa12.33□□□□□ -0.43
CTNNA1-236ENST00000522792 RAB11AP62491 216 aa12.33□□□□□ -0.43
CTNNA1-236ENST00000522792 TMEM249Q2WGJ8 235 aa12.33□□□□□ -0.43
CTNNA1-236ENST00000522792 PRSS57Q6UWY2 283 aa12.33□□□□□ -0.43
CTNNA1-236ENST00000522792 PINX1Q96BK5 328 aaKnown RBP12.33□□□□□ -0.43
CTNNA1-236ENST00000522792 NCBP2LA6PVI3 153 aaKnown RBP12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 TEX46H3BTG2 121 aa12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 RPL27AP46776 148 aaKnown RBP12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 WT1-ASQ06250 92 aa12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 KLF17Q5JT82 389 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 Q8N6K4 173 aa12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 WFDC11Q8NEX6 87 aa12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 NPBQ8NG41 125 aa12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 TMEM147Q9BVK8 224 aa12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 CR1P17927 2039 aa12.33□□□□□ -0.44
CTNNA1-236ENST00000522792 A0A1W2PN81 502 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 NDUFA3O95167 84 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 REG1AP05451 166 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 FAM106CPP0CH98 169 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 BRS3P32247 399 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 CHRNA7P36544 502 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 COMPP49747 757 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 DMRTA1Q5VZB9 504 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 TMEM182Q6ZP80 229 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 SCGB1C1Q8TD33 95 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 UQCC1Q9NVA1 299 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 SEC11BP0C7V7 166 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 FAM157CP0CG43 387 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 OR13C7P0DN81 318 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 RNASE2P10153 161 aaKnown RBP12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 SNCAP37840 140 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 SSBP2P81877 361 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 ERHP84090 104 aaKnown RBP12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 EBI3Q14213 229 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 ATP6V1FQ16864 119 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 TUSC1Q2TAM9 212 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 LRRC75BQ2VPJ9 315 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 IQCF2Q8IXL9 164 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 RNF141Q8WVD5 230 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 RSG1Q9BU20 258 aa12.32□□□□□ -0.44
CTNNA1-236ENST00000522792 SMCO3A2RU48 225 aa12.31□□□□□ -0.44
CTNNA1-236ENST00000522792 ZNF705EA8MWA4 302 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-236ENST00000522792 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
CTNNA1-236ENST00000522792 CNIH1O95406 144 aa12.31□□□□□ -0.44
CTNNA1-236ENST00000522792 MAS1LP35410 378 aa12.31□□□□□ -0.44
CTNNA1-236ENST00000522792 C5orf64Q2M2E5 130 aa12.31□□□□□ -0.44
CTNNA1-236ENST00000522792 SMUG1Q53HV7 270 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms