RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 TSPAN4O14817 238 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 MRPS14O60783 128 aaKnown RBP4.61□□□□□ -1.67
PABPC1-220ENST00000522658 CA1P00915 261 aaPredicted RBP4.61□□□□□ -1.67
PABPC1-220ENST00000522658 CLEC3BP05452 202 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 CDK1P06493 297 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 CTXN2P0C2S0 81 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 GCSHP23434 173 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 MYL9P24844 172 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 PSMA1P25786 263 aaKnown RBP4.61□□□□□ -1.67
PABPC1-220ENST00000522658 CALRP27797 417 aaKnown RBP4.61□□□□□ -1.67
PABPC1-220ENST00000522658 PSMB6P28072 239 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 ARPC4P59998 168 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 NANOS2P60321 138 aaKnown RBP4.61□□□□□ -1.67
PABPC1-220ENST00000522658 ERVK-16P61578 105 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 PLA2G7Q13093 441 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 CATR1Q13166 79 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 TRAM1Q15629 374 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 Q56UQ5 140 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 CT83Q5H943 113 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 SPSB3Q6PJ21 355 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 LRRTM1Q86UE6 522 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 DMBX1Q8NFW5 382 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 OR11H2Q8NH07 326 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 OR4A5Q8NH83 315 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 FAM3DQ96BQ1 224 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 BSCL2Q96G97 398 aaPredicted RBP4.61□□□□□ -1.67
PABPC1-220ENST00000522658 HSD17B10Q99714 261 aaKnown RBP4.61□□□□□ -1.67
PABPC1-220ENST00000522658 COMMD5Q9GZQ3 224 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 CSTL1Q9H114 145 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 C11orf68Q9H3H3 251 aaKnown RBP4.61□□□□□ -1.67
PABPC1-220ENST00000522658 SLC2A9Q9NRM0 540 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 SCN3BQ9NY72 215 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 RAB22AQ9UL26 194 aa4.61□□□□□ -1.67
PABPC1-220ENST00000522658 AK6Q9Y3D8 172 aaKnown RBP4.61□□□□□ -1.67
PABPC1-220ENST00000522658 IGKV3-7A0A075B6H7 116 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 MFSD2BA6NFX1 497 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 OR2T8A6NH00 312 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 LINC00473A8K010 186 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 TEX22C9J3V5 150 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 DNASE2O00115 360 aaPredicted RBP4.6□□□□□ -1.67
PABPC1-220ENST00000522658 TGOLN2O43493 480 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 YIF1AO95070 293 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 UCHL1P09936 223 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 AREGP15514 252 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 RPA2P15927 270 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 HIST1H1DP16402 221 aaKnown RBP4.6□□□□□ -1.67
PABPC1-220ENST00000522658 GNB3P16520 340 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 CTRB1P17538 263 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 HLA-GP17693 338 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 FCGR2BP31994 310 aaPredicted RBP4.6□□□□□ -1.67
PABPC1-220ENST00000522658 TFPI2P48307 235 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 MFAP2P55001 183 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 CLDN12P56749 244 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 GNG2P59768 71 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 EWSR1Q01844 656 aaKnown RBP eCLIP4.6□□□□□ -1.67
PABPC1-220ENST00000522658 RELQ04864 619 aaPredicted RBP4.6□□□□□ -1.67
PABPC1-220ENST00000522658 INSL4Q14641 139 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 TMEM187Q14656 261 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 SPHARQ15513 63 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 HES5Q5TA89 166 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 LIPKQ5VXJ0 399 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 CTRB2Q6GPI1 263 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 THOC7Q6I9Y2 204 aaKnown RBP4.6□□□□□ -1.67
PABPC1-220ENST00000522658 C19orf35Q6ZS72 473 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 STHQ8IWL8 128 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 VKORC1L1Q8N0U8 176 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 FAM89BQ8N5H3 189 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 NANOGP1Q8N7R0 232 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 TSPAN14Q8NG11 270 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 OR10R2Q8NGX6 335 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 SCARB1Q8WTV0 552 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 TMEM190Q8WZ59 177 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 TMEM203Q969S6 136 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 MAP6D1Q9H9H5 199 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 S100A14Q9HCY8 104 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 TAS2R8Q9NYW2 309 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 RBMX2Q9Y388 322 aaKnown RBP4.6□□□□□ -1.67
PABPC1-220ENST00000522658 V9GY05 133 aa4.6□□□□□ -1.67
PABPC1-220ENST00000522658 TMEM272A0A1B0GTI8 110 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 NDUFA4O00483 81 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 NUPL2O15504 423 aaKnown RBP4.59□□□□□ -1.67
PABPC1-220ENST00000522658 ZNF207O43670 478 aaKnown RBP4.59□□□□□ -1.67
PABPC1-220ENST00000522658 SCGB2A1O75556 95 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 SCGNO76038 276 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 CTSDP07339 412 aaPredicted RBP4.59□□□□□ -1.67
PABPC1-220ENST00000522658 ZNF735P0CB33 412 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 NFYAP23511 347 aaPredicted RBP4.59□□□□□ -1.67
PABPC1-220ENST00000522658 DTYMKP23919 212 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 QRFPP83859 136 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 ODF3L2Q3SX64 289 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 SOHLH1Q5JUK2 328 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 SLC25A24Q6NUK1 477 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 UNQ9165/PRO28630Q6UXU0 137 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 ZNF66Q6ZN08 573 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 HSD17B13Q7Z5P4 300 aaPredicted RBP4.59□□□□□ -1.67
PABPC1-220ENST00000522658 APRG1Q8IVJ8 170 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 UBE2DNLQ8IWF7 75 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 H1FOOQ8IZA3 346 aaPredicted RBP4.59□□□□□ -1.67
PABPC1-220ENST00000522658 PACRGLQ8N7B6 248 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 TMEM167AQ8TBQ9 72 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms