RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 OPN1MW2P0DN77 364 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 OPN1MW3P0DN78 364 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 MYOD1P15172 320 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 FGF7P21781 194 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 GPX4P36969 197 aaPredicted RBP7.79□□□□□ -1.16
SPARC-205ENST00000522348 COMPP49747 757 aaPredicted RBP7.79□□□□□ -1.16
SPARC-205ENST00000522348 RUNX1Q01196 453 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 ZNF616Q08AN1 781 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 KLRD1Q13241 179 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 RAB31Q13636 194 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 BSXQ3C1V8 233 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 PPP1R27Q86WC6 154 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 LFNGQ8NES3 379 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 NPBQ8NG41 125 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 OR2T10Q8NGZ9 312 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 CFHR4Q92496 578 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 PERPQ96FX8 193 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 TBX15Q96SF7 602 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 METTL1Q9UBP6 276 aaKnown RBP7.79□□□□□ -1.16
SPARC-205ENST00000522348 WDR83OSQ9Y284 106 aa7.79□□□□□ -1.16
SPARC-205ENST00000522348 SPTBN1Q01082 2364 aaKnown RBP7.79□□□□□ -1.16
SPARC-205ENST00000522348 USF3Q68DE3 2245 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 TRAV1-1A0A0B4J248 108 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 PRSS46E5RG02 174 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 TSPAN9O75954 239 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 ZP3P21754 424 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 BRS3P32247 399 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 EBI3Q14213 229 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 SSX2Q16385 188 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 TMEM41BQ5BJD5 291 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 TOR2AQ5JU69 321 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 LDLRAD2Q5SZI1 272 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 LHFPL4Q7Z7J7 247 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 TMEM170AQ8WVE7 144 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 CACNG8Q8WXS5 425 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 RBMXL1Q96E39 390 aaKnown RBP7.78□□□□□ -1.16
SPARC-205ENST00000522348 RSG1Q9BU20 258 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 BEX4Q9NWD9 120 aaPredicted RBP7.78□□□□□ -1.16
SPARC-205ENST00000522348 KIAA1456Q9P272 454 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 RFNGQ9Y644 331 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 ARID1AO14497 2285 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 DOPEY1Q5JWR5 2465 aa7.78□□□□□ -1.16
SPARC-205ENST00000522348 RELNP78509 3460 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 IGHV4-30-2A0A087WSY4 118 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 A0A1B0GW64 132 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 A0A1W2PRD5 423 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 A0A1W2PRF3 423 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 A0A1W2PRM7 423 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 SMCO3A2RU48 225 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 NBR2O15453 112 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 CYB5BO43169 146 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 FAM106CPP0CH98 169 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 OR13C7P0DN81 318 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 RNASE2P10153 161 aaKnown RBP7.77□□□□□ -1.17
SPARC-205ENST00000522348 RPL27AP46776 148 aaKnown RBP7.77□□□□□ -1.17
SPARC-205ENST00000522348 FHITP49789 147 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 PEA15Q15121 130 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 PLGLAQ15195 96 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 TNXAQ16473 311 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 CLEC12BQ2HXU8 276 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 MRGPRG-AS1Q2M3A8 158 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 TUSC1Q2TAM9 212 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 TEPPQ6URK8 271 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 TREML4Q6UXN2 200 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 LRRC75A-AS1Q8N1F1 130 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 BPIFCQ8NFQ6 507 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 OR10W1Q8NGF6 305 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 RNASEH2CQ8TDP1 164 aaKnown RBP7.77□□□□□ -1.17
SPARC-205ENST00000522348 SFT2D1Q8WV19 159 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 EAF1Q96JC9 268 aaPredicted RBP7.77□□□□□ -1.17
SPARC-205ENST00000522348 SRSF8Q9BRL6 282 aaKnown RBP7.77□□□□□ -1.17
SPARC-205ENST00000522348 PBDC1Q9BVG4 233 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 NPCDR1Q9BY65 106 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 SMDT1Q9H4I9 107 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 KCNIP2Q9NS61 270 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 RPRMQ9NS64 109 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 SLC39A9Q9NUM3 307 aa7.77□□□□□ -1.17
SPARC-205ENST00000522348 HRNRQ86YZ3 2850 aaPredicted RBP7.77□□□□□ -1.17
SPARC-205ENST00000522348 CENPVL3A0A0U1RRI6 287 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 TMEM218A2RU14 115 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 CGB1A6NKQ9 187 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 B4DSR2 109 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 E7EUB6 86 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 NPFFO15130 113 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 NDUFA3O95167 84 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 IGKV1D-33P01593 117 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 IGKV1-33P01594 117 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 CD5P06127 495 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 GATA3P23771 443 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 CNTFRP26992 372 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 OPRK1P41145 380 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 HES1Q14469 280 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 MMDQ15546 238 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 ACOT6Q3I5F7 207 aaPredicted RBP7.76□□□□□ -1.17
SPARC-205ENST00000522348 FFAR4Q5NUL3 377 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 ETFRF1Q6IPR1 90 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 OR10G4Q8NGN3 311 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 OR10G9Q8NGN4 311 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 OR10G7Q8NGN6 311 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms