RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 CD1BP29016 333 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 TGFBR1P36897 503 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 KRTAP10-3P60369 221 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 DHODHQ02127 395 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 KIR2DS1Q14954 304 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 ABCA11PQ4W5N1 156 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 HACD4Q5VWC8 232 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 Q8NBF4 154 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 OR10G7Q8NGN6 311 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 OR4A4PQ8NGN8 299 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 OR5H6Q8NGV6 325 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 OR2T10Q8NGZ9 312 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 CITED1Q99966 193 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 MRPS26Q9BYN8 205 aaKnown RBP5.32□□□□□ -1.56
SDCBP-208ENST00000520228 PARLQ9H300 379 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 RHBDL2Q9NX52 303 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 OR1A1Q9P1Q5 309 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 ZNF230Q9UIE0 474 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-208ENST00000520228 MOB4Q9Y3A3 225 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 ANK2Q01484 3957 aa5.32□□□□□ -1.56
SDCBP-208ENST00000520228 A0A0A6YYH2 397 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 IGKV1-6A0A0C4DH72 117 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 ZNF320A2RRD8 509 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 TMEM235A6NFC5 223 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 A6NJ64 397 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 NCBP2LA6PVI3 153 aaKnown RBP5.31□□□□□ -1.56
SDCBP-208ENST00000520228 ZNF736B4DX44 427 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-208ENST00000520228 ITGB1BP1O14713 200 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 RAB29O14966 203 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 BET1O15155 118 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 MOSP00540 346 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 GSTT2P0CG29 244 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 GSTT2BP0CG30 244 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 DTYMKP23919 212 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 VDAC2P45880 294 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-208ENST00000520228 SERPINB10P48595 397 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 GNG2P59768 71 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 VBP1P61758 197 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 NCS1P62166 190 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 PITPNAQ00169 270 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 EBI3Q14213 229 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 HERPUD1Q15011 391 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 LRRC37A5PQ49AS3 106 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 OR10J5Q8NHC4 309 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 MAFIPQ8WZ33 124 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 SLC25A46Q96AG3 418 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 SLC25A38Q96DW6 304 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 S1PR3Q99500 378 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 AGMATQ9BSE5 352 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 ST6GALNAC5Q9BVH7 336 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 MRPL20Q9BYC9 149 aaKnown RBP5.31□□□□□ -1.56
SDCBP-208ENST00000520228 PARP12Q9H0J9 701 aaKnown RBP5.31□□□□□ -1.56
SDCBP-208ENST00000520228 DCSTAMPQ9H295 470 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 IFI27L2Q9H2X8 130 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 DIABLOQ9NR28 239 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 RDH8Q9NYR8 311 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 PIPOXQ9P0Z9 390 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 SPATA2Q9UM82 520 aa5.31□□□□□ -1.56
SDCBP-208ENST00000520228 FGF16O43320 207 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 DIRAS3O95661 229 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 SAA2P0DJI9 122 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-208ENST00000520228 ALDH3B2P48448 385 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 RPL39P5Q59GN2 51 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 GPR107Q5VW38 600 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 FAM71F2Q6NXP2 309 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 Q6ZS49 121 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 ZNF833PQ6ZTB9 187 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 Q8N6K4 173 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 C5orf56Q8N8D9 126 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 SAMD12Q8N8I0 201 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 OR8H1Q8NGG4 311 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 S100A16Q96FQ6 103 aaKnown RBP5.3□□□□□ -1.56
SDCBP-208ENST00000520228 ABHD14BQ96IU4 210 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 NABP2Q9BQ15 211 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 GINS4Q9BRT9 223 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 NAA50Q9GZZ1 169 aaKnown RBP5.3□□□□□ -1.56
SDCBP-208ENST00000520228 ABCG5Q9H222 651 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 ZNF221Q9UK13 617 aa5.3□□□□□ -1.56
SDCBP-208ENST00000520228 IGKV1D-8A0A087WSZ0 117 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 TRBV6-7A0A0A0MS04 114 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 IGHV3-38A0A0C4DH36 116 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 SSX5O60225 188 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 GABARAPO95166 117 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 CTXN2P0C2S0 81 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 OR8U9P0C7N5 309 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 CT45A6P0DMU7 189 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 CT45A5P0DMU8 189 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 CT45A7P0DMV0 189 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 GPR183P32249 361 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 RORCP51449 518 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 UBE2NLQ5JXB2 153 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 Q6ZVQ6 151 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 OR8U1Q8NH10 309 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 ACOT12Q8WYK0 555 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 RBMXL1Q96E39 390 aaKnown RBP5.29□□□□□ -1.56
SDCBP-208ENST00000520228 RASL11BQ9BPW5 248 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 ZNF251Q9BRH9 671 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 TOLLIPQ9H0E2 274 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 AUNIPQ9H7T9 357 aa5.29□□□□□ -1.56
SDCBP-208ENST00000520228 PLSCR3Q9NRY6 295 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms