RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 CDC42EP3Q9UKI2 254 aa6.43□□□□□ -1.38
CLK4-203ENST00000519583 ANK3Q12955 4377 aaKnown RBP6.43□□□□□ -1.38
CLK4-203ENST00000519583 IGHV2-26A0A0B4J1V2 119 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 IGHV2-70DA0A0C4DH43 119 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 UPK2O00526 184 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 RRHO14718 337 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 CRLF1O75462 422 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 OPN1MWP04001 364 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 H2AFB1P0C5Y9 115 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 SAA1P0DJI8 122 aaPredicted RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 OPN1MW2P0DN77 364 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 OPN1MW3P0DN78 364 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 GATA3P23771 443 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 COX7A1P24310 79 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 SRP14P37108 136 aaKnown RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 ELLP55199 621 aaPredicted RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 HSPE1P61604 102 aaKnown RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 CCL20P78556 96 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 GUK1Q16774 197 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 ATP6V1FQ16864 119 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 SPSB3Q6PJ21 355 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 COMMD1Q8N668 190 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 PSMG3Q9BT73 122 aaPredicted RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 PARD6GQ9BYG4 376 aaPredicted RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 TMA7Q9Y2S6 64 aaKnown RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 POLR3KQ9Y2Y1 108 aaPredicted RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 OR51B2Q9Y5P1 312 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 INSIG2Q9Y5U4 225 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 C2CD3Q4AC94 2353 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 OR8U8P0C7N1 319 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 FGF7P21781 194 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 ZNF137PP52743 207 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 GUCA2BQ16661 112 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 FAM71F2Q6NXP2 309 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 TGIF2LXQ8IUE1 241 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 SCRT1Q9BWW7 348 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 RPRMQ9NS64 109 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 ONECUT1Q9UBC0 465 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 PRNDQ9UKY0 176 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 J3QLI3 93 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 ENSAO43768 121 aaKnown RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 AVPP01185 164 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 IL6RP08887 468 aaPredicted RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 SFTA3P0C7M3 94 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 RPP30P78346 268 aaKnown RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 BTN1A1Q13410 526 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 OSR1Q8TAX0 266 aaPredicted RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 SFT2D1Q8WV19 159 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 TMEM170AQ8WVE7 144 aa6.42□□□□□ -1.38
CLK4-203ENST00000519583 FLYWCH2Q96CP2 140 aaKnown RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 EIF5A2Q9GZV4 153 aaKnown RBP6.42□□□□□ -1.38
CLK4-203ENST00000519583 IGHV3-72A0A0B4J1Y9 119 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 A0A1W2PPH5 198 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 LY86O95711 162 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 IL3RAP26951 378 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 PAX2Q02962 417 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 TMEM177Q53S58 311 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 ETV3LQ6ZN32 361 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 LFNGQ8NES3 379 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 C8orf46Q8TAG6 207 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 LHX4Q969G2 390 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 ENY2Q9NPA8 101 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 ZFHX3Q15911 3703 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 JMJD1CQ15652 2540 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 KBTBD11O94819 623 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 SRD5A1P18405 259 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 PPT1P50897 306 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 VWC2Q2TAL6 325 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 DPPA3Q6W0C5 159 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 PDPNQ86YL7 162 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 CLEC7AQ9BXN2 247 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 BET1LQ9NYM9 111 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 CARHSP1Q9Y2V2 147 aaKnown RBP6.41□□□□□ -1.38
CLK4-203ENST00000519583 WASHC3Q9Y3C0 194 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 NAV3Q8IVL0 2385 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 EIF3GO75821 320 aaKnown RBP eCLIP6.41□□□□□ -1.38
CLK4-203ENST00000519583 IGLV1-47P01700 117 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 IFNA4P05014 189 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 LIPFP07098 398 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 SERF2P84101 59 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 PEA15Q15121 130 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 ZNF726P1Q15940 193 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 HLA-DRB5Q30154 266 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 C10orf91Q5T1B1 145 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 PUSL1Q8N0Z8 303 aaKnown RBP6.41□□□□□ -1.38
CLK4-203ENST00000519583 LY6G5BQ8NDX9 201 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 SLC24A4Q8NFF2 622 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 OR4C13Q8NGP0 309 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 AIFM2Q9BRQ8 373 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 SEC11CQ9BY50 192 aa6.41□□□□□ -1.38
CLK4-203ENST00000519583 SMCO3A2RU48 225 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 RBP4P02753 201 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 NPY1RP25929 384 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 PRRX1P54821 245 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 RAB2AP61019 212 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 ARF6P62330 175 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 PAX8Q06710 450 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 TMEM41BQ5BJD5 291 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 ACSM6Q6P461 480 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 SSX7Q7RTT5 188 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms